PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN19314.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | bHLH | ||||||||
Protein Properties | Length: 193aa MW: 22072.6 Da PI: 10.0095 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 24.1 | 6.3e-08 | 19 | 69 | 6 | 54 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-..STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskK..lsKaeiLekAveYIksL 54 + +Er+RR +++s ++L +l+P++ k+ ++K l + L +A +YI+++ KHN19314.1 19 KTIERNRRTHMKSLCHQLSSLIPPNLKPAKPKlmLGLQDQLDLAARYIRQM 69 689*********************6677777755677799********998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 9.09E-5 | 11 | 74 | No hit | No description |
PROSITE profile | PS50888 | 9.807 | 13 | 69 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 8.4E-9 | 17 | 87 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 7.07E-9 | 17 | 86 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 6.9E-5 | 19 | 69 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence Send to blast |
MMKKRVASTS NESSKLDRKT IERNRRTHMK SLCHQLSSLI PPNLKPAKPK LMLGLQDQLD 60 LAARYIRQMT ERVEKLKRQK EQAMSNQSND GRKMFNNNVE SKLPILELRD LGSGIEVILV 120 TGLNKTFMLY EVISVLEEEG AEVVTASFST VGDKIFYVVH AQAKISRVGV ETTRVYNRLQ 180 EFIVPPEIWP EDV |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN19314.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028237129.1 | 1e-141 | transcription factor bHLH168-like | ||||
TrEMBL | A0A445KBH9 | 1e-140 | A0A445KBH9_GLYSO; Transcription factor bHLH162 isoform A | ||||
STRING | GLYMA06G19490.1 | 1e-140 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF6849 | 21 | 41 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G20970.1 | 5e-26 | bHLH family protein |
Publications ? help Back to Top | |||
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