PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN19140.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family WRKY
Protein Properties Length: 332aa    MW: 38036 Da    PI: 7.7679
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN19140.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY76.23.8e-24221276258
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 
                  DgynWrKY  K+vkgs +  sYY+Ct+++C vkkkver+  ++++v+i+Y+g+H+h
  KHN19140.1 221 GDGYNWRKYEDKVVKGSANQLSYYKCTQPTCYVKKKVERTI-EGEIVDIHYQGTHTH 276
                 6****************************************.**************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081116.937215276IPR003657WRKY domain
Gene3DG3DSA:2.20.25.806.8E-20217276IPR003657WRKY domain
SuperFamilySSF1182901.83E-18218276IPR003657WRKY domain
SMARTSM007743.2E-21220278IPR003657WRKY domain
PfamPF031064.2E-17222276IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005794Cellular ComponentGolgi apparatus
GO:0016021Cellular Componentintegral component of membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MPFRNSNMIV QKKLWRIVGF LSSVIGLICY ALSSSFNHLF GEWNFLKIIL YAVISFSISS  60
IMLLLKKWKL SKSFMLKAHV GVLVLLITSV YSFVSDKAVN GKPDMLSLIS CFAFAFMSLC  120
LSKEIDLGFG ADLLNFFLGC LTVQLMHIHL MLSIVAAIFC YCFMFFRSKL DSQSQIGTVE  180
VEDHVNIEID AEDGKREFDD NRSNFQANHS HQQVPLLRMV GDGYNWRKYE DKVVKGSANQ  240
LSYYKCTQPT CYVKKKVERT IEGEIVDIHY QGTHTHCERM HNMKRNSSSE YLYSVLPSEP  300
VAFPDQSFAS QGNGELDYHV QQQRTPQYPN EI
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN19140.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2362330.0AC236233.2 Glycine max clone GM_WBc0210H12, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028199681.10.0uncharacterized protein LOC114384220
TrEMBLA0A0B2QCY30.0A0A0B2QCY3_GLYSO; WRKY transcription factor 44
STRINGGLYMA14G37960.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF147431012
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37260.14e-20WRKY family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]