PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN19075.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | bHLH | ||||||||
Protein Properties | Length: 437aa MW: 47560.8 Da PI: 4.8937 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 16.9 | 1.2e-05 | 326 | 363 | 12 | 54 |
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L +A+eYIk L KHN19075.1 326 RKEKLGDRITALQQLVSPF-----GKTDTASVLHEAIEYIKFL 363 677888999*******998.....8****************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 11.973 | 314 | 363 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 8.09E-6 | 324 | 368 | No hit | No description |
SuperFamily | SSF47459 | 1.7E-11 | 324 | 378 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 9.9E-9 | 328 | 371 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0042631 | Biological Process | cellular response to water deprivation | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0071215 | Biological Process | cellular response to abscisic acid stimulus | ||||
GO:0071472 | Biological Process | cellular response to salt stress | ||||
GO:2000214 | Biological Process | regulation of proline metabolic process | ||||
GO:2000377 | Biological Process | regulation of reactive oxygen species metabolic process | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0001046 | Molecular Function | core promoter sequence-specific DNA binding | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 437 aa Download sequence Send to blast |
MAEDFQAAIC GENWWNNINP TRSVFPLMPS TCSVAAADHA GNYSTWQSTT DFVDLKGTRS 60 CAELETDNNL SFLDAEKPQQ SESGSILINS TLQMMGFGKS SSTSSNWNQS LLGSGFDSVL 120 QEETGIGGGS QVSTVDALKP MNQEFSLDQQ SLNSVVTSTG SLSGGFPVVS ASYGYPSTLI 180 QSLYEPEPQP QQQNSLFTNP SMSYSSSSAN YGICSNELSP TWSKVSSLPK PSMPKQQLSG 240 LHFSNNTAFW NSSAEALNDI RAGVFTSSQA QYQTAKFEEK PNCPNTLLNK LKREESPDAA 300 KKNSPEPAFK RQRIETPSPL PTFKVRKEKL GDRITALQQL VSPFGKTDTA SVLHEAIEYI 360 KFLHDQVSVL STPYMKNNGA PIQHQQDCDN LKDSEGAKQD LRSRGLCLVP ISSTFPVANE 420 TSVDFWTSTF GGALIGR |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN19075.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KT031120 | 0.0 | KT031120.1 Glycine max clone HN_CCL_146 bHLH transcription factor (Glyma13g32320.2) mRNA, partial cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003541762.1 | 0.0 | transcription factor bHLH112 isoform X1 | ||||
Refseq | XP_028191774.1 | 0.0 | transcription factor bHLH112-like isoform X1 | ||||
TrEMBL | A0A0B2QCQ7 | 0.0 | A0A0B2QCQ7_GLYSO; Transcription factor bHLH112 | ||||
TrEMBL | K7M1S1 | 0.0 | K7M1S1_SOYBN; BHLH transcription factor | ||||
STRING | GLYMA13G32320.2 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1118 | 33 | 106 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61660.1 | 2e-65 | bHLH family protein |
Publications ? help Back to Top | |||
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