PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN18220.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | bZIP | ||||||||
Protein Properties | Length: 288aa MW: 31769.2 Da PI: 5.6252 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 42.8 | 1.1e-13 | 121 | 172 | 3 | 54 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 + kr rrk +NR +ArrsR+RK+a++ Le v++L+ eN +L k+ ++ KHN18220.1 121 DMKRLRRKVSNRDSARRSRRRKQAQLSDLELQVEKLKVENATLYKQFTDASQ 172 68*****************************************987665555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 4.3E-12 | 119 | 183 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.887 | 121 | 184 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.7E-11 | 122 | 167 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 9.1E-8 | 123 | 158 | No hit | No description |
SuperFamily | SSF57959 | 6.66E-10 | 123 | 172 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 126 | 141 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.10 | 2.0E-4 | 159 | 193 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 288 aa Download sequence Send to blast |
MAMTTTTESD LDYELRYLSL AVTDTFTAFQ NLLPDAMTSF SACGLIDPLC SQNLTPKHST 60 ITATIDSQSS ICATSNVGSP VSANKPEGRE NHTKGATSGS SEPSDEDDEA GACEQSTNPA 120 DMKRLRRKVS NRDSARRSRR RKQAQLSDLE LQVEKLKVEN ATLYKQFTDA SQHFREADTN 180 NRVLKSDVEA LRAKVKLAED MVTRSSFTTL NNQLLQTQHH QMSTPQQLNT TNLRRMAHVS 240 PTITVHGNDV SYNNGGQNSA LGNLDMSFND INEVMNDAMS CGTIWPLD |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 125 | 141 | RRKVSNRDSARRSRRRK |
2 | 135 | 142 | RRSRRRKQ |
3 | 137 | 142 | SRRRKQ |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN18220.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT096669 | 0.0 | BT096669.1 Soybean clone JCVI-FLGm-21C7 unknown mRNA. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001237027.1 | 0.0 | bZIP transcription factor bZIP62 | ||||
Refseq | XP_028235421.1 | 0.0 | basic leucine zipper 9-like | ||||
TrEMBL | A0A0B2QAD1 | 0.0 | A0A0B2QAD1_GLYSO; Basic leucine zipper 9 isoform A | ||||
TrEMBL | Q0GPH5 | 0.0 | Q0GPH5_SOYBN; BZIP transcription factor bZIP62 | ||||
STRING | GLYMA06G08390.1 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF4195 | 34 | 58 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G24800.1 | 3e-42 | basic leucine zipper 9 |
Publications ? help Back to Top | |||
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