PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN15874.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | bHLH | ||||||||
Protein Properties | Length: 398aa MW: 44924 Da PI: 6.2446 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 41.8 | 1.9e-13 | 184 | 235 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i A++++k+L+ KHN15874.1 184 QRMTHIAVERNRRRQMNDHLSVLRSLMPPS---YIQRGDQASIIGGAIDFVKELE 235 79****************************...9******************995 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 5.30E-13 | 182 | 239 | No hit | No description |
PROSITE profile | PS50888 | 15.751 | 183 | 234 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.3E-16 | 183 | 248 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.1E-10 | 184 | 235 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.7E-13 | 184 | 249 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.6E-10 | 189 | 240 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0055114 | Biological Process | oxidation-reduction process | ||||
GO:0032440 | Molecular Function | 2-alkenal reductase [NAD(P)] activity | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 398 aa Download sequence Send to blast |
MERLQGPLNS CFFGDPLGVN CLDHVLVDEE SLRLEEEEHL LISSLEDNMP FLQMLQSVES 60 PQFFPLKETN FQTLLRLQHK KNPWEGIAYF PRMEAQQVQA ALELESCVTH DMSEMQYSPV 120 KSESNELQHP LSVSCFEKKV NYECNQEPQK VSQTCPKSQP TATKERRKRK RTRPSKNKED 180 VENQRMTHIA VERNRRRQMN DHLSVLRSLM PPSYIQRGDQ ASIIGGAIDF VKELEQLLQS 240 LEAQKRTRKN EEGGGGGGSS SSSSSTMLCK PPPPPLLLLS SPHGYGMRSS PSDEVNCGDE 300 VKAENKSEAA DIKVTLIQTH VNLKIECQRK PGQLLKVIVA LEDLRLTILH LNITSSETSV 360 LYSLNLKIEE DCKLCSASDI AETVHQIFSF INGVARDH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 165 | 170 | RRKRKR |
2 | 184 | 195 | RMTHIAVERNRR |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN15874.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC235293 | 0.0 | AC235293.1 Glycine max strain Williams 82 clone GM_WBb0059D15, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006598866.1 | 0.0 | transcription factor bHLH57 isoform X2 | ||||
Refseq | XP_028205761.1 | 0.0 | transcription factor bHLH57-like isoform X1 | ||||
TrEMBL | A0A445GCZ5 | 0.0 | A0A445GCZ5_GLYSO; Transcription factor bHLH70 isoform B | ||||
TrEMBL | K7MEP1 | 0.0 | K7MEP1_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA16G02020.2 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF6894 | 34 | 49 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46810.1 | 9e-62 | bHLH family protein |
Publications ? help Back to Top | |||
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