PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN09568.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | ERF | ||||||||
Protein Properties | Length: 322aa MW: 35057.7 Da PI: 9.6021 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 66.5 | 5e-21 | 136 | 185 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrd + + +r++lg+f+tae Aa+a+++a+++++g KHN09568.1 136 KYRGVRQRP-WGKWAAEIRDpF-----KaARVWLGTFDTAEAAARAYDEAALRFRG 185 8********.**********66.....56*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.730.10 | 6.0E-33 | 135 | 194 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 25.686 | 136 | 193 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 1.7E-14 | 136 | 185 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 4.78E-23 | 136 | 195 | No hit | No description |
SMART | SM00380 | 1.0E-36 | 136 | 199 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 5.69E-23 | 136 | 194 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 7.3E-12 | 137 | 148 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 7.3E-12 | 159 | 175 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 322 aa Download sequence Send to blast |
MNNPTLSRLF PGLNREREMS AMVSALTHVV SGEVPITGDS SSSSSLVLHH QPHDDTVIVT 60 PTMPSSSSSS TYVVGTSSLK RSRENDTYTS SLFSHPPSSS PAMPTRAEYA TREMGNSVYE 120 YRTTTENATR DEGRRKYRGV RQRPWGKWAA EIRDPFKAAR VWLGTFDTAE AAARAYDEAA 180 LRFRGNKAKL NFPENVTLRQ PQFTVSNSPS SLVSITTSTD PVVHSTRPLL LPSQASTATN 240 VYEYFQLSGF PTNTNLYDGN RMFVTSNAMA SHHLQSSSSL LSSSSSAFVS SVTSQDTSLS 300 SLYSGQLPPW SKVSGHSSSS SG |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1gcc_A | 9e-24 | 135 | 196 | 1 | 63 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN09568.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028236371.1 | 0.0 | ethylene-responsive transcription factor ERF110-like | ||||
TrEMBL | A0A445K9U0 | 0.0 | A0A445K9U0_GLYSO; Ethylene-responsive transcription factor ERF114 isoform A | ||||
STRING | GLYMA06G15341.1 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF4933 | 32 | 54 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G50080.1 | 1e-22 | ethylene response factor 110 |
Publications ? help Back to Top | |||
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