PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KHN07773.1

Organism

Glycine soja

Taxonomic ID

3848

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja

Family

VOZ

Protein Properties

Length: 478aa MW: 53974.4 Da PI: 5.4983

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KHN07773.1	genome	TCUHK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	434	2e-133	235	451	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfdls 99 pppsafl+pkcalwdc+rpaqg+ew+q+ycss+h+ la neglpg+tp+lrp+gi++kdg+lfaa+ ak+qgkevgip+cegaa++kspwna+e+fdls KHN07773.1 235 PPPSAFLAPKCALWDCFRPAQGVEWCQNYCSSCHELLANNEGLPGMTPILRPWGIGVKDGPLFAAVLAKTQGKEVGIPSCEGAASTKSPWNAPEFFDLS 333 89*********************************************************************************************** PP VOZ 100 llegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekksakg 198 +leget+rewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmke+gg+krsyymdpqp+s++ewhlyeyein++d +alyrlelklvd+kks+kg KHN07773.1 334 FLEGETVREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMKEHGGQKRSYYMDPQPLSYLEWHLYEYEINNQDGCALYRLELKLVDKKKSPKG 432 *********************************************************************************************** PP VOZ 199 kvskdsladlqkklgrlta 217 kv+k+sl+dlq+k+g+lta KHN07773.1 433 KVTKESLTDLQNKMGQLTA 451 ***************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 478 aa Download sequence Send to blast
MMRESFKGKG GSSSLQSMKE KEKHLVEKIQ GIFNSLQCAR KEGRGNDIVI FEEQMHQLLR 60 EWKAELESPA NSLADGSFGS FPSELAQMLL GTEEKDDATS PLTKPVPLKN EILTNNISDI 120 NFQYFQEKHF NDNQPLGHTF EGSASTLYNN AYNSSDMTQL DYHPFTLNQD MGHNSNLLGQ 180 FDLYHDLRHN TEMKNNSEST QFSLEGFDCS QFFEADDNVQ HGENIIPNIL PNICPPPSAF 240 LAPKCALWDC FRPAQGVEWC QNYCSSCHEL LANNEGLPGM TPILRPWGIG VKDGPLFAAV 300 LAKTQGKEVG IPSCEGAAST KSPWNAPEFF DLSFLEGETV REWLFFDKPR RAFESGNRKQ 360 RSLPDYSGRG WHESRKQVMK EHGGQKRSYY MDPQPLSYLE WHLYEYEINN QDGCALYRLE 420 LKLVDKKKSP KGKVTKESLT DLQNKMGQLT AAVPSTDDGQ PVKGKTKAKS ENDESPNK

Sequence ? help Back to Top

Protein Sequence Length: 478 aa Download sequence Send to blast

MMRESFKGKG GSSSLQSMKE KEKHLVEKIQ GIFNSLQCAR KEGRGNDIVI FEEQMHQLLR  60
EWKAELESPA NSLADGSFGS FPSELAQMLL GTEEKDDATS PLTKPVPLKN EILTNNISDI  120
NFQYFQEKHF NDNQPLGHTF EGSASTLYNN AYNSSDMTQL DYHPFTLNQD MGHNSNLLGQ  180
FDLYHDLRHN TEMKNNSEST QFSLEGFDCS QFFEADDNVQ HGENIIPNIL PNICPPPSAF  240
LAPKCALWDC FRPAQGVEWC QNYCSSCHEL LANNEGLPGM TPILRPWGIG VKDGPLFAAV  300
LAKTQGKEVG IPSCEGAAST KSPWNAPEFF DLSFLEGETV REWLFFDKPR RAFESGNRKQ  360
RSLPDYSGRG WHESRKQVMK EHGGQKRSYY MDPQPLSYLE WHLYEYEINN QDGCALYRLE  420
LKLVDKKKSP KGKVTKESLT DLQNKMGQLT AAVPSTDDGQ PVKGKTKAKS ENDESPNK

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KHN07773.1

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AP015039	0.0	AP015039.1 Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_028238060.1	0.0	transcription factor VOZ1-like
Refseq	XP_028238061.1	0.0	transcription factor VOZ1-like
Swissprot	Q9SGQ0	1e-149	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A0B2PJM4	0.0	A0A0B2PJM4_GLYSO; Transcription factor VOZ1
STRING	GLYMA06G43890.3	0.0	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1498	34	94

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-142	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Qi X, et al. Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing. Nat Commun, 2014. 5: p. 4340 [PMID:25004933] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]