PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN06774.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 281aa    MW: 30519.7 Da    PI: 6.6719
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN06774.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.80.000451581951254
                 HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 R +++ +++++L++l+ +      +K + a++L +A+ YI+ L
  KHN06774.1 158 RKEKLGERIATLQQLVSPF-----GKTDTASVLHEAMGYIRFL 195
                 77788899********998.....8****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000838.91E-6138200No hitNo description
PROSITE profilePS5088810.906146195IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.1E-7157202IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.83E-10157207IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    Send to blast
MEAKKEYEVD HLSTPTGTSF SQLLFGDDDD DVDESALGLA VDQSYSYNYN NLTRSPLFSI  60
HKAPQMLCFG NHQNEEGDVL LPETNLTPQK SVITSSDSSS ASASSCNHTN TAFNSLPKSN  120
NSLQKKRQEG VAKVGVGSQR QTKKNKAENP TSTGHAKRKE KLGERIATLQ QLVSPFGKTD  180
TASVLHEAMG YIRFLHDQVQ VLCSPYLQSL PSSYHQNQHG GGGNNEEEVN KDLRSKGLCL  240
IPVGCTVHVA GSNGADFWSS AAIGNNVSFT ISQAVKRNQD Q
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN06774.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0918651e-133BT091865.1 Soybean clone JCVI-FLGm-9A23 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028185173.10.0transcription factor bHLH113-like isoform X1
RefseqXP_028185174.10.0transcription factor bHLH113-like isoform X1
TrEMBLA0A445ITB40.0A0A445ITB4_GLYSO; Transcription factor bHLH113 isoform A
STRINGGLYMA10G40710.30.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF103212129
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19500.19e-49bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]