PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN06293.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family WRKY
Protein Properties Length: 368aa    MW: 41319.5 Da    PI: 5.3059
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN06293.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY91.28e-29129190159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                 ldDgy+WrKYGqK++ g++fpr+YYrCt++   gC ++k+v++s+edp ++eitY+g+H+++
  KHN06293.1 129 LDDGYSWRKYGQKDILGAKFPRGYYRCTYRnvqGCLATKQVQKSDEDPMICEITYKGRHTCT 190
                 59***************************98989**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.8E-28123191IPR003657WRKY domain
PROSITE profilePS5081122.791124187IPR003657WRKY domain
SuperFamilySSF1182908.37E-25127191IPR003657WRKY domain
SMARTSM007746.6E-40129191IPR003657WRKY domain
PfamPF031066.3E-26130189IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 368 aa     Download sequence    Send to blast
MEENFKCEQV GLIDELMQGK ELAKQLCDHL LVSSSSSSSH ETNEVLIEKI LSTYEKALAM  60
LNCKADVGES KAKNGSMMDS HCPLTNGSPK SEVLEPEVKN KNVFKKRKTM SKLTEQVKVR  120
LGTAHEGSLD DGYSWRKYGQ KDILGAKFPR GYYRCTYRNV QGCLATKQVQ KSDEDPMICE  180
ITYKGRHTCT QASHLNKTVA PPSKRKVNFL GANKHQTHQI KNQIQQEKIE QPPETFFTFG  240
SSGLEVKIED MDHKEDMFPS FCFSSPLKEG SENGDNNSLF SYTMMENNLM ENFSPTFISP  300
TSSDIESNIF YHWGSTGIGQ SVQSSESDIT DIVSAPTSVT NSPIMDLDFF DKIDFDTDFP  360
LIPPELCT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B4e-191281871374Disease resistance protein RRS1
5w3x_D4e-191281871374Disease resistance protein RRS1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN06293.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0312340.0KT031234.1 Glycine max clone HN_CCL_106 WRKY transcription factor (Glyma07g06320.1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028239417.10.0probable WRKY transcription factor 46
TrEMBLA0A445JSZ80.0A0A445JSZ8_GLYSO; Putative WRKY transcription factor 41
STRINGGLYMA07G06320.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49334157
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.11e-44WRKY family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]