PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN03635.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family C2H2
Protein Properties Length: 464aa    MW: 52041.6 Da    PI: 8.5036
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN03635.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.90.00033407429123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++Cp+C+k F++   L  H r+H
  KHN03635.1 407 HECPICNKIFRSGQALGGHKRSH 429
                 79******************999 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003550.217597IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.47375102IPR007087Zinc finger, C2H2
SuperFamilySSF576672.58E-87697No hitNo description
PROSITE patternPS0002807797IPR007087Zinc finger, C2H2
PfamPF139124.8E-77799IPR007087Zinc finger, C2H2
SuperFamilySSF576672.58E-8402429No hitNo description
PfamPF139122.0E-11406429IPR007087Zinc finger, C2H2
PROSITE profilePS501579.702407429IPR007087Zinc finger, C2H2
SMARTSM003550.018407429IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280409429IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 464 aa     Download sequence    Send to blast
MMSEYHHHSA LANEERNNNN NNAANANAMF KFDGGRKRKR DLGSEENGNN NYGLRENPKK  60
TTRFVHSNAT LQLDKFCKEC GKGFPSLKAL CGHMACHSEK DKRRFATEKQ KLVMDSQSDT  120
ETSSAPRRSK GMKFKTLSNN NQPQSSSVSE VEQEQEEVAR CLMMLSKDSS YKGRFALLTE  180
SSDNNSIVIT KSPSLETKVT TMINGYGKNS MSSAYVERKL ELEQNKDLKF KSAEVGYDSD  240
NSDSGYFRYG PKSDVSNDDG FFRNEVKSSK VGYLNGFDQE YDVESRKVLS RGRSRSSEFN  300
EFVLEDWENY DREDGVAART FDSKKFKKSN YDDSLGQNLG GVSTRKYECL TNEMYNGCSD  360
DSAYESDENS TDTDSYPAPK AHSNRNNLSV QKGKKKKKLK SKKSKAHECP ICNKIFRSGQ  420
ALGGHKRSHF VGGSEENTLV IRPSAPPAAV PCLIDLNLPA PVDE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1393402KKKKKLKSKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN03635.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003517826.20.0uncharacterized protein LOC100805520
RefseqXP_028231491.10.0uncharacterized protein LOC114411937
TrEMBLA0A0B2P3200.0A0A0B2P320_GLYSO; Zinc finger protein ZAT9
STRINGGLYMA01G06880.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF11013080
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26610.11e-65C2H2-like zinc finger protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]