PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Gorai.013G044500.3 | ||||||||
Common Name | B456_013G044500 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | bZIP | ||||||||
Protein Properties | Length: 398aa MW: 42808.8 Da PI: 6.7015 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 45.8 | 1.3e-14 | 330 | 371 | 5 | 46 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 +r+rr++kNRe+A rsR+RK+a++ eLe +v +L++ N++L Gorai.013G044500.3 330 RRQRRMIKNRESAARSRARKQAYTLELEAEVSKLKEMNEELL 371 79************************************9864 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.7E-12 | 326 | 384 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.473 | 328 | 373 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.88E-10 | 330 | 373 | No hit | No description |
Pfam | PF00170 | 1.1E-12 | 330 | 372 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 1.45E-24 | 330 | 375 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 6.2E-14 | 330 | 373 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 333 | 348 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 398 aa Download sequence Send to blast |
MGSNLNFKRF GEAPSMEGNG SKAVGNFPLA RQSSIYSLTF DELQNTFGGL GKDFGSMNMD 60 ELLRNISTAE ETQSLMTASV PGGEGGVSGG NLQRQGSLTL PRTLSQKTVE EVWKDLFKEN 120 DGAKNVSNGG GGGGANLPQR QQTLGEMTLE EFLGRAGIVR EDMQSIGVPN NNGFFDNNSG 180 LALPFQQTNG NNGFLSNNNS VLNQPPILPL DVSGAKSSHS QQQQQPLFPK QQTVAFAPSM 240 HLINTTHFPS PGAQGSVVET SDLSMNTNLV QSSGLQSGGM GIVGLPSPAS HMSPDVISKN 300 SVDTTSFSPV PYVLGRGRKR SAALEKVVER RQRRMIKNRE SAARSRARKQ AYTLELEAEV 360 SKLKEMNEEL LRKQVSTYHL DFDSSFSIET LVDGPFS* |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | TISSUE SPECIFICITY: Expressed in roots and flowers. {ECO:0000269|PubMed:11884679}. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the ABA-responsive element (ABRE). Mediates stress-responsive ABA signaling. {ECO:0000269|PubMed:11884679, ECO:0000269|PubMed:15361142}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA). {ECO:0000269|PubMed:10636868, ECO:0000269|PubMed:16284313}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | JX964384 | 1e-122 | JX964384.1 Gossypium hirsutum clone NBRI_TRANS-653 microsatellite sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012462272.1 | 0.0 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 7 | ||||
Refseq | XP_012462273.1 | 0.0 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 7 | ||||
Refseq | XP_012462274.1 | 0.0 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 7 | ||||
Refseq | XP_012462275.1 | 0.0 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 7 | ||||
Swissprot | Q9M7Q3 | 1e-101 | AI5L6_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 6 | ||||
TrEMBL | A0A0D2VAG0 | 0.0 | A0A0D2VAG0_GOSRA; Uncharacterized protein | ||||
STRING | Gorai.013G044500.1 | 0.0 | (Gossypium raimondii) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G45249.1 | 9e-84 | abscisic acid responsive elements-binding factor 2 |
Link Out ? help Back to Top | |
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Phytozome | Gorai.013G044500.3 |