PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Gorai.010G124200.2 | ||||||||
Common Name | B456_010G124200 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | bZIP | ||||||||
Protein Properties | Length: 324aa MW: 35953.3 Da PI: 4.6476 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 49.1 | 1.2e-15 | 161 | 217 | 3 | 59 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 lkr rrk +NRe+ArrsR+RK+++++eLe +++L +eN++L k+l + +++ + Gorai.010G124200.2 161 HLKRLRRKLSNRESARRSRKRKQEQLAELEFQAEQLRGENDSLFKQLTNAHQLIRDV 217 58******************************************9999988887665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 4.4E-11 | 158 | 210 | No hit | No description |
SMART | SM00338 | 4.0E-14 | 159 | 223 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.955 | 161 | 207 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.5E-12 | 161 | 213 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 7.41E-11 | 162 | 213 | No hit | No description |
CDD | cd14702 | 1.53E-17 | 164 | 212 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 166 | 181 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 324 aa Download sequence Send to blast |
MKRSASELAL EEFSRNTMST TTIPAPSAFP DFALHPPIAH LSNSFHFTEF SGDAAELSPQ 60 THVLLSQTLT SHLDSQSSFC GNESWGSTVC EGNNSNYRSR ENEVRGATTL SSDHDPSDDD 120 DDDVEEEEDD DDDEDEEGGE GEGEVEEADA GQSEQSLDPS HLKRLRRKLS NRESARRSRK 180 RKQEQLAELE FQAEQLRGEN DSLFKQLTNA HQLIRDVGTN NRVLTSNVQA LRHKVKLAED 240 MLAGGSFTCG LNQLVQSHLT SQQPIATNNH NLGRVVQVDN FEHLLNLSHI PPIVQPQALQ 300 HPLQLYCVNK SVAILVKYFK GLP* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 161 | 168 | LKRLRRKL |
2 | 165 | 181 | RRKLSNRESARRSRKRK |
3 | 175 | 181 | RRSRKRK |
4 | 175 | 182 | RRSRKRKQ |
5 | 177 | 182 | SRKRKQ |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Gra.1403 | 1e-150 | flower| flowering |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | JX964183 | 1e-115 | JX964183.1 Gossypium hirsutum clone NBRI_TRANS-452 microsatellite sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012451878.1 | 0.0 | PREDICTED: basic leucine zipper 9 | ||||
TrEMBL | A0A0D2UDB5 | 0.0 | A0A0D2UDB5_GOSRA; Uncharacterized protein | ||||
STRING | Gorai.010G124200.1 | 0.0 | (Gossypium raimondii) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G24800.1 | 5e-33 | basic leucine zipper 9 |
Link Out ? help Back to Top | |
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Phytozome | Gorai.010G124200.2 |
Publications ? help Back to Top | |||
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