PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Gorai.009G212600.3 | ||||||||
Common Name | B456_009G212600 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | bZIP | ||||||||
Protein Properties | Length: 456aa MW: 49028 Da PI: 9.5512 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 47.8 | 3.1e-15 | 345 | 388 | 5 | 48 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++eN++L+k+ Gorai.009G212600.3 345 RRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENQELRKK 388 79****************************************86 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.5E-14 | 341 | 404 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.438 | 343 | 388 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 5.96E-27 | 345 | 390 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 4.8E-15 | 345 | 388 | No hit | No description |
Pfam | PF00170 | 5.7E-13 | 345 | 388 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.19E-12 | 345 | 390 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 348 | 363 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0009651 | Biological Process | response to salt stress | ||||
GO:0009738 | Biological Process | abscisic acid-activated signaling pathway | ||||
GO:0010255 | Biological Process | glucose mediated signaling pathway | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0000976 | Molecular Function | transcription regulatory region sequence-specific DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 456 aa Download sequence Send to blast |
MGTNMNFGSN PPPSGDGGGN KPPGNNLLTR QPSIYSLTFD EFQSTMGGIG KDFGSMNMDE 60 LLRNIWSAEE IQTMASSGGV LEGNGGLQRQ GSLTLPRTLS QKTVDEVWKD ISKEYSLGKD 120 GIGGGGGTNN MPQRQQTLGE MTLEEFLVRA GVVIEDTQLA GKVNNEGFFG GNNTGFEIGF 180 QQGGKGPNLM GTRIPDGGNQ INIQASNLHP NVNGVRSNQH QLAQQHQHQQ PIFPKQTGVG 240 YGAQIPLQSG GQLGSPGIRS GMHGIGDQGI SNGLIQAGAL QGGGMGMVGL GGAVGVATGS 300 PANQVSSDGI GKSSGDTSSV SPVPYVFNGS MRGRKYSAVE KVAERRQRRM IKNRESAARS 360 RARKQAYTME LEAEVAKLKE ENQELRKKHV FYFSFFQCTP LSFAHNSTYT FSYRLYFGCL 420 QAEIMEMQKN QVIEMVDMQQ GAKKRCLRRT QTGPW* |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | TISSUE SPECIFICITY: Expressed in roots, leaves, flowers and siliques but not in seeds. {ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313}. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313, ECO:0000269|PubMed:16463099}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00186 | DAP | Transfer from AT1G45249 | Download |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269|PubMed:10636868, ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313, ECO:0000269|PubMed:16463099}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012445168.1 | 0.0 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5 | ||||
Swissprot | Q9M7Q4 | 1e-129 | AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5 | ||||
TrEMBL | A0A0D2S5N8 | 0.0 | A0A0D2S5N8_GOSRA; Uncharacterized protein | ||||
STRING | Gorai.009G212600.1 | 0.0 | (Gossypium raimondii) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G45249.1 | 1e-103 | abscisic acid responsive elements-binding factor 2 |
Link Out ? help Back to Top | |
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Phytozome | Gorai.009G212600.3 |
Publications ? help Back to Top | |||
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