PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Gorai.007G241400.1 | ||||||||
Common Name | B456_007G241400 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | bZIP | ||||||||
Protein Properties | Length: 225aa MW: 24932.9 Da PI: 9.4314 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 30.6 | 7.4e-10 | 125 | 165 | 5 | 45 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 k rr+++N eAAr+sR+RKka++++Le L++ ++L Gorai.007G241400.1 125 KTLRRLAQNQEAARKSRLRKKAYVQQLESSRLRLTELEQEL 165 788*************************8766666655544 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 7.8E-8 | 118 | 169 | No hit | No description |
SMART | SM00338 | 3.5E-8 | 121 | 192 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 8.979 | 123 | 167 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 5.9E-7 | 125 | 165 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.69E-7 | 125 | 167 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 128 | 143 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence Send to blast |
MRELVNLKQQ GSIFSLKSNN FGVFSNTLHY GALNMSIGAT MIVSSGTGCL DTGQFMYQKG 60 ATFGAPLGNG QIENWADSGL ANNSQQTDTS TDVDTDHTKQ LPRVQHGAVM VNTVDQPKSK 120 NGDQKTLRRL AQNQEAARKS RLRKKAYVQQ LESSRLRLTE LEQELERTQQ QGIFIASGLS 180 GDHGHTVAGN AALAFDMEYG RWFDEHQRLK LCNNLIHRMI NYGR* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012438631.1 | 1e-112 | PREDICTED: transcription factor HBP-1b(c38)-like | ||||
TrEMBL | A0A0D2SQI8 | 1e-166 | A0A0D2SQI8_GOSRA; Uncharacterized protein | ||||
STRING | Gorai.007G241400.1 | 1e-167 | (Gossypium raimondii) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68640.1 | 1e-32 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Gorai.007G241400.1 |
Publications ? help Back to Top | |||
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