 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Gorai.006G141000.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
|
| Family |
bZIP |
| Protein Properties |
Length: 485aa MW: 54397.4 Da PI: 7.7486 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Gorai.006G141000.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 34.2 | 5.7e-11 | 192 | 227 | 5 | 40 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLea 40
k rr+++NReAAr+sR+RKka++++Le L++
Gorai.006G141000.1 192 KTLRRLAQNREAARKSRLRKKAYVQQLESSRIRLTQ 227
7789***********************985555544 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 485 aa
Download sequence Send
to blast |
MATSRGNYMN HSIQLQHHQQ NNHHQQQQQQ HHQHQIQEHN QPHLNQIPYA MMQSSSSSSI 60
PGNFISSSKD SGAYDLGELD QALFLYLDGQ DTSTVQDQRN NSGMRPPTLN IFPSQPMHVE 120
PPSSTKTNTG LVSPATSGSK RPSESSMELA NARNDTLSSA PHPPVKAVKS EGNRKGPTSS 180
SEQEGPKTPD PKTLRRLAQN REAARKSRLR KKAYVQQLES SRIRLTQLEQ ELQRARTQGM 240
FFGGGNIIGG DQGLPVGINN ISPDAALFDM EYTRWLEEHH RLMCELRAAI QEHLPENELR 300
IFVDNCLAHL DQVMNLKSMV AKTDVFHLVS GMWKTPAERC FMWMGGFRPS DLIKVILNQI 360
EPLTEQQIMG ICALQQSTQE AEEALTQGLE ALNQSVSDII TSDSLSCPPN MNNYMGQMAV 420
AINKLSTIEG FVRQADNLRH QAILRLHQIL TIRQAARCLL AIAEYFHRLR ALSSLWLARP 480
RQDQ*
|
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Specifically expressed in roots. {ECO:0000269|PubMed:12777042}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | JX583330 | 1e-58 | JX583330.1 Gossypium hirsutum clone NBRI_GE16346 microsatellite sequence. |
