PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Gorai.005G102300.3 | ||||||||
Common Name | B456_005G102300, LOC105797323 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 403aa MW: 43644.2 Da PI: 10.0445 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 50.1 | 6.1e-16 | 325 | 377 | 5 | 57 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 +r+rr++kNRe+A rsR+RK+a++ eLe k ++L++eN++L+k+ el ++ + Gorai.005G102300.3 325 RRQRRMIKNRESAARSRARKQAYTTELEAKLAKLKEENEELRKKHAELMEMQK 377 79**********************************************99866 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 7.1E-13 | 321 | 386 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.725 | 323 | 374 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.38E-11 | 325 | 375 | No hit | No description |
CDD | cd14707 | 8.36E-28 | 325 | 379 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.4E-14 | 325 | 375 | No hit | No description |
Pfam | PF00170 | 1.6E-13 | 325 | 377 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 328 | 343 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 403 aa Download sequence Send to blast |
MEANMKLKNF GSNQPLPADG GGNTLLSRQP SIYSLTFDEF QSTMGGIGKD FGSMNMDELL 60 KNIWSAEETQ TMAFYSGGLD AYGGLQRQGS LTLPRTLSQK TVDEVWKDIS KEYSIGKDGI 120 GTAAGTNHVP QRYQTLGEMT LEEFLVKAGV VREDTQFAGK DNNVNGGFFD GFQQGGRTPN 180 FMGNRLSEVG FQASNLPLNV NGVKSNQHQL PQQQQPIFPR QPAVGFGIQM PLQSGGQLGS 240 PGNRGGITGM GDQGPPNGLI QGGKMGMVGL GGPVSVATGS PANHFSSDGI GKSSADTSSV 300 SPVPYVLNGS SRGRKCSAVE KVAERRQRRM IKNRESAARS RARKQAYTTE LEAKLAKLKE 360 ENEELRKKHA ELMEMQKNQV MEMNMQQGPK KQCLRRTRTG PW* |
Expression -- Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
Uniprot | TISSUE SPECIFICITY: Expressed in roots, leaves, flowers and siliques but not in seeds. {ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313}. |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313, ECO:0000269|PubMed:16463099}. |
Regulation -- Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269|PubMed:10636868, ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313, ECO:0000269|PubMed:16463099}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_012482747.1 | 0.0 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5 | ||||
Swissprot | Q9M7Q4 | 1e-126 | AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5 | ||||
TrEMBL | A0A0D2NAE4 | 0.0 | A0A0D2NAE4_GOSRA; Uncharacterized protein | ||||
STRING | Gorai.005G102300.1 | 0.0 | (Gossypium raimondii) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G45249.1 | 1e-100 | abscisic acid responsive elements-binding factor 2 |
Link Out ? help Back to Top | |
---|---|
Phytozome | Gorai.005G102300.3 |
Entrez Gene | 105797323 |
Publications ? help Back to Top | |||
---|---|---|---|
|