PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KXZ45543.1
Organism
Gonium pectorale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium
Family C2H2
Protein Properties Length: 741aa    MW: 78405.4 Da    PI: 4.5739
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KXZ45543.1genomeGPGRPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.13.2e-05299323123
                 EEETTTTEEESSHHHHHHHHHH..T CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirt..H 23 
                 ++C  C+k+F++  +Lk+H r+  H
  KXZ45543.1 299 FECVVCDKVFRSDKQLKNHERSkkH 323
                 89*****************998666 PP
2zf-C2H215.35.8e-05714732321
                 ETTTTEEESSHHHHHHHHH CS
     zf-C2H2   3 CpdCgksFsrksnLkrHir 21 
                 C+ Cg++Fs++ +L +Hi 
  KXZ45543.1 714 CTVCGQVFSSRNQLFKHIA 732
                 *****************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.287.1101.3E-29698IPR001623DnaJ domain
SuperFamilySSF465652.36E-26779IPR001623DnaJ domain
SMARTSM002711.0E-24968IPR001623DnaJ domain
CDDcd062572.07E-201065IPR001623DnaJ domain
PROSITE profilePS5007619.9771076IPR001623DnaJ domain
PfamPF002261.1E-231173IPR001623DnaJ domain
PRINTSPR006251.3E-171230IPR001623DnaJ domain
PRINTSPR006251.3E-173045IPR001623DnaJ domain
PRINTSPR006251.3E-174868IPR001623DnaJ domain
PROSITE patternPS0063605372IPR018253DnaJ domain, conserved site
PRINTSPR006251.3E-176887IPR001623DnaJ domain
SuperFamilySSF576673.58E-14288340No hitNo description
PROSITE profilePS5015710.388299328IPR007087Zinc finger, C2H2
SMARTSM003550.017299323IPR015880Zinc finger, C2H2-like
PfamPF121712.6E-10299323IPR022755Zinc finger, double-stranded RNA binding
PROSITE patternPS000280301323IPR007087Zinc finger, C2H2
SMARTSM003550.13712736IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.619712741IPR007087Zinc finger, C2H2
PROSITE patternPS000280714736IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 741 aa     Download sequence    Send to blast
MPPAAHKQRC LYEVLDVPLD AEEDAIKKAY RKQALLWHPD KNAHRAEEAA ERFKEIQNAY  60
EILSDKHERA WYDQHREQIL RSGERHQAGG GGGFEGGGGK PAEDEELFAF FSSSCYSGYG  120
DGPKGFYGVY ESVFAKLAKQ EQEAWERKDA GSDSEDDVAG GSAPSFPAFG TSESDAASVN  180
AFYAYWSNFT THRNFAQVRR RMEEENRKAR RTARREWIDT VRELVGFVRK RDKRVAKAQA  240
EEAARRAARE AEDQERRKKE REERLARAAE YVEADWIRSS EAHDAEGEEE EELEEEEVFE  300
CVVCDKVFRS DKQLKNHERS KKHAEAVAAL RAMLEEEEAE AAGLDLGAGG GGGESDGEGP  360
SGAASSAAER SVGGGGGGGS KKKKKARKRA QKGNSAMQSM DGDGSDDEDE AGPSPSAPKG  420
KQQPQKPQGK APAPPPPPPR GKQPQQQPQR RQEEEEEEEQ DSDEDHAGGD DEEEDAMLAR  480
MMAAHARVRD GGGGGAKGRA PAAESAAPDQ DGSEAEEEEG EAAAAQEASG SGEGEEEGDE  540
EEEDEQEDEE EEDEDAMLAR MMRAQRPAGR AGGKGGGGSG GGAAKGKPGG AVTSAAPAGG  600
AAAGTAADVD DDDDEEGEGE DEEAEATTSH AAAAAAKDTK QGGKQPAAKA GGKGTAGGAS  660
KSGSKAPPPP VAGGGGDSDS DDGGKGSTKR EKRKQKLAAR KAAATAPGPG QLGCTVCGQV  720
FSSRNQLFKH IADTGHAALR G
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2lgw_A1e-191092389DnaJ homolog subfamily B member 2
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1571577GGKGGGG
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A150G6Z80.0A0A150G6Z8_GONPE; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP443077
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74250.11e-43DNAJ heat shock N-terminal domain-containing protein