PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KXZ41944.1
Organism
Gonium pectorale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium
Family M-type_MADS
Protein Properties Length: 795aa    MW: 73669.5 Da    PI: 4.8339
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KXZ41944.1genomeGPGRPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF37.92.3e-122311342
                HHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS
      SRF-TF 13 fskRrngilKKAeELSvLCdaevaviifss 42
                f++R++ + KKA ELSvLCd +v +iif++
  KXZ41944.1  2 FARRKASLVKKAMELSVLCDCDVGLIIFGP 31
                899*************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5006613.4142IPR002100Transcription factor, MADS-box
PfamPF003192.1E-11232IPR002100Transcription factor, MADS-box
SMARTSM004320.0018241IPR002100Transcription factor, MADS-box
SuperFamilySSF554551.7E-11273IPR002100Transcription factor, MADS-box
PRINTSPR004042.2E-5419IPR002100Transcription factor, MADS-box
PRINTSPR004042.2E-51940IPR002100Transcription factor, MADS-box
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 795 aa     Download sequence    Send to blast
MFARRKASLV KKAMELSVLC DCDVGLIIFG PGSASTQQGG PGGPGSGPGA GPRLYQFSSV  60
AMDELLERYA AMVAEPHERR RGGELLRHYY ELFPDADGVP ESATAAAATA AAAAAAASDA  120
FDRNGPSGVG LPSGPMGGVG PHGGGGGMAP LDGMLGSAGG GGARRPSDLG GLKRSRGPSP  180
GLGELPAGGS GLMGPGPAGL RSFLPGPGTG AGLLPGGLHG AGSAAGLGPG GLPGPVRRLP  240
GVGGAGGLPL EGIKAAGFLD KRNYPVSPRS EKAYEELTAA FDQLTALRSR RPGGGQGLPG  300
SGLQPFVPSG GGGGGGGGFS LAAQQQQLQA LIAAQQQHRA AAAAAASGAS GGGAPAGGGG  360
GGGGAKRFKP LSILVPEVAS QPIIPTTGLT PLLASGAGGS GAPLPTASSA GAGRRSLSQG  420
GMGGGGGLSD GGAAADDLGS LMLLGGGAGS SGGGGLQYRG SIDGSAANLL NVPSPLPAGG  480
AAAVLFGSLD GGPLSVRSSS GNGMLLGGGG LSGFGGGGGG GLSGFGGGGG SLGGGLERNS  540
SLAMALASPG GPMGLDSALR GLAPMDGLDW PSASPRSSAG GAGPGGAVDG DGGDFPDEAE  600
PEGEGEEGEG EGGSGGMLLD GDEAGLIVRG TSLAKLAPHA REAALGPSPG GTPSGGATPV  660
ASEGAGAAAV GAAPPPHARA VGGGGPASSA SNSGAFGAAS ASAAAAAAAA GSDPLGADGG  720
AVDQRLPPGA EMAATGTGAA AATPSGRGPG LPSHLTMELS FSDLSSGFGS GSGLAAAAAA  780
QEAEGEGTGE GRGMD
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A150FWE70.0A0A150FWE7_GONPE; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP36561314
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57390.12e-09AGAMOUS-like 18