PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KXZ41283.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium
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Family | Nin-like | ||||||||
Protein Properties | Length: 214aa MW: 22216.4 Da PI: 5.1638 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 49.7 | 7e-16 | 30 | 68 | 14 | 52 |
RWP-RK 14 FslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 +lpikd+A e gv+l+ K++CR +G++RWP+Rk++sl KXZ41283.1 30 LHLPIKDVAFEFGVSLSFFKKQCRALGVRRWPSRKLSSL 68 69**********************************997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 13.799 | 10 | 90 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 5.1E-13 | 31 | 68 | IPR003035 | RWP-RK domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence Send to blast |
MGCGGGEGEA CGGLANRGGN GGLQRDWERL HLPIKDVAFE FGVSLSFFKK QCRALGVRRW 60 PSRKLSSLAR VRKALEGDGC GGGDEAAQKE LLSLLDQNVE DIMEDPDAPI YDEFIKCRHE 120 QYRVQMVAAA AAGGGGGGVD SGGADSDDGC DSRGTTASGG CSGASSRRAV AAANAVSTGG 180 ALTGQRRCRC SRRRRSDDGS GAEPERDDPD SDAS |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A150FUG9 | 1e-149 | A0A150FUG9_GONPE; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Chlorophytae | OGCP6094 | 2 | 8 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G74480.1 | 2e-08 | RWP-RK domain-containing protein |