PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.U037800.1.p
Common NameGLYMA_U037800, LOC100794464
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 436aa    MW: 46573.4 Da    PI: 6.2754
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.U037800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.14.3e-10278326355
                        HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +h+ +Er RR++i +++  L+el+P +    +k   Ka +L + ++Y++sLq
  Glyma.U037800.1.p 278 NSHSLAERVRREKISERMRLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 326
                        58**************************....999*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.61E-11273330No hitNo description
SuperFamilySSF474596.02E-17273343IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.485275325IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.3E-16276343IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.9E-7278326IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.6E-10281331IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 436 aa     Download sequence    Send to blast
MGGQENAMGG FQHGNESILT CPPTSGLSGP NVNVSEMAIS SVSMAKPSNV VANPFLASST  60
WDPLVSLSQA QTFGGSSMVS HNEFVNANSS YPLVLDNQGG ISNTSHLVQY MSDSNLGGIV  120
PKVHSYASGG FSEMVGSGSF CQHGSGDMAD TGYPTHYNPI KEAPIINGEQ SQVEDSIPEE  180
EAPGSAPSGN RRKRGLDHNS TFSPNKNAEG DAVKDSPGKA SDGSKEHEKR PKVEQNNGAD  240
VRGKQSVKQA KDNNNSQSGE APKENFIHVR ARRGQATNSH SLAERVRREK ISERMRLLQE  300
LVPGCNKITG KAVMLDEIIN YVQSLQQQVE FLSMKLATVN PELNFDVDRI LSKDILQSRI  360
GHGIGAYGPG INSSHTFPNG SFHGTLAGMS STSSQFPPLP QNVLDHEFQS FYGIGYDSNT  420
ALDNLGPNGR LKTEL*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.194430.0cotyledon| root| seed coat| stem
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.U037800.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150360.0AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003556954.10.0transcription factor bHLH74
RefseqXP_028210828.10.0transcription factor bHLH74-like
TrEMBLA0A445GAV50.0A0A445GAV5_GLYSO; Transcription factor bHLH74 isoform B
TrEMBLK7K0S80.0K7K0S8_SOYBN; Uncharacterized protein
STRINGGLYMA0041S00210.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF75853345
Representative plantOGRP5816313
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.13e-80bHLH family protein