PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Glyma.U029500.1.p | ||||||||
Common Name | GLYMA_U029500, LOC102668006 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | bZIP | ||||||||
Protein Properties | Length: 147aa MW: 17138.5 Da PI: 10.8376 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 30.7 | 6.9e-10 | 61 | 105 | 5 | 49 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 ++ rr+q+NRe+ArrsR RKk +e+L + L eN++++++l Glyma.U029500.1.p 61 RKLRRMQSNRESARRSRWRKKRHLENLMNQLNRLRMENQKYRNRL 105 6789*************************************9876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.4E-8 | 57 | 121 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.91 | 59 | 105 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.21E-9 | 61 | 115 | No hit | No description |
Pfam | PF00170 | 1.3E-7 | 61 | 105 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.8E-7 | 61 | 112 | No hit | No description |
CDD | cd14702 | 4.78E-12 | 62 | 111 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 64 | 79 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 147 aa Download sequence Send to blast |
MFFHEEAEAV QSSYFPVLET MFTPSEIEEL FSLVNEPASP GSGSGSGSQG SNRAVRSSHE 60 RKLRRMQSNR ESARRSRWRK KRHLENLMNQ LNRLRMENQK YRNRLFLTMH QNLLLSLENE 120 RLRSESMTLM ARLSDLYQIL GTMISQ* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Glyma.U029500.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP015036 | 2e-94 | AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006595997.1 | 1e-101 | bZIP transcription factor 2 | ||||
Refseq | XP_028199931.1 | 1e-101 | bZIP transcription factor 2-like | ||||
TrEMBL | A0A445H3Z4 | 1e-100 | A0A445H3Z4_GLYSO; BZIP transcription factor 44 | ||||
TrEMBL | I1M8V4 | 1e-100 | I1M8V4_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA14G10020.1 | 1e-101 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF5996 | 30 | 52 | Representative plant | OGRP11732 | 4 | 6 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49760.1 | 2e-16 | basic leucine-zipper 5 |
Link Out ? help Back to Top | |
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Phytozome | Glyma.U029500.1.p |
Entrez Gene | 102668006 |