PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.20G007700.1.p
Common NameGLYMA_20G007700, LOC102665715
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 299aa    MW: 33690.9 Da    PI: 5.6977
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.20G007700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_150.93.5e-16213271361
                          XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 
                          e++rer++q+NRe+ArrsR RK++e+eeL + ++ L+ eN+ L ++l++l++e+ +  +
  Glyma.20G007700.1.p 213 EIRRERKRQSNRESARRSRMRKEKECEELHKQMEMLKDENSVLTQRLKSLSEECLEICN 271
                          899***************************************************87655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.9E-14208267No hitNo description
SMARTSM003381.4E-15211275IPR004827Basic-leucine zipper domain
PfamPF001709.8E-14212268IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.771213265IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.38E-11214269No hitNo description
CDDcd147024.41E-18216266No hitNo description
PROSITE patternPS000360218233IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010310Biological Processregulation of hydrogen peroxide metabolic process
GO:0090342Biological Processregulation of cell aging
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    Send to blast
MGTQKSNMFD APFKYMVPED KEIPDRPLPS HWTPSMQAYN TSGSTPTPFL NQQAAGSHMP  60
LYMWVNQVNN TLLQSDALHD PRMLSSKPTV AGDAVLAFSE IVHRTFGEQN LNSIKKCARN  120
LQPKSLITKE STENGSKSSI MKTNRDGVLC SEANGNKGSP DEDHITNDFP STKKQHCNLM  180
LENASSTKLN QDLETGLDAS DANAQLVNLE KDEIRRERKR QSNRESARRS RMRKEKECEE  240
LHKQMEMLKD ENSVLTQRLK SLSEECLEIC NENDAIEEEL IKMYGPESIA DLLLFKPT*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1227234RRSRMRKE
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.20G007700.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150433e-49AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006605461.10.0G-box-binding factor 1 isoform X1
RefseqXP_006605462.10.0G-box-binding factor 1 isoform X1
RefseqXP_025983085.10.0G-box-binding factor 1 isoform X1
RefseqXP_028221189.10.0G-box-binding factor 1-like isoform X1
TrEMBLA0A0B2NU390.0A0A0B2NU39_GLYSO; G-box-binding factor 1
TrEMBLI1ND160.0I1ND16_SOYBN; Uncharacterized protein
STRINGGLYMA20G01030.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF149401013
Representative plantOGRP7001767
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36730.22e-33G-box binding factor 1