PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.19G193400.1.p
Common NameGLYMA_19G193400, LOC100788624
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 500aa    MW: 55561.1 Da    PI: 7.6016
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.19G193400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.39.3e-10147209163
                          XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                          eke +r rr   NRe+Ar   +R++a +eeL++k+++L aeN+ Lk e e   ke+++l++ +
  Glyma.19G193400.1.p 147 EKEARRIRRILANRESARQTIRRRQALCEELTRKAATLVAENENLKREKELALKEYESLETTN 209
                          799*******************************************************99876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.3E-5144209No hitNo description
PfamPF001708.4E-9147209IPR004827Basic-leucine zipper domain
SMARTSM003382.9E-10147211IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.829149212IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.38E-6151206No hitNo description
CDDcd147022.60E-14152202No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 500 aa     Download sequence    Send to blast
MMDAESDKRS ASTFSPSSSS SYSSSSCLRL DRLVDSEEIE AAETLAQLAN CNTHSSDKWC  60
TKQDTTRVMR ESPTLLHSDL SLGPGGQAIA GQQPDEKIST TSVETEMFQQ DDCSRHMKVE  120
QDADVLPNTS YSLVRTTKSR RNLTEEEKEA RRIRRILANR ESARQTIRRR QALCEELTRK  180
AATLVAENEN LKREKELALK EYESLETTNK NLKTQIAKSI NTEVEKTPVE PVSSVAEITP  240
SSGNGPWFLY NHFPVSQIFW PSILQSSNPV HLQNTSFNSI AIPPNANVPC SSESESRHKQ  300
NNLINDNRTQ NPFYMFPCPW LFPLPQFGNG QSSPSNSLKD EQDNLSLCKP CSSSSSLNTL  360
ANVDYQAALP IKLKTEACGW TEAIPINNPG CATPRSSLDG GEKKTGCYII EKYHGPALGC  420
NGHASAVKQE HDFQLLSAPN NKVSSIAYIS TSSLEKKQEK FICQEKNLVD AVAAAEARKR  480
RKELTKQKSI HNRQSRMHC*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1477482RKRRKE
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.286600.0flower
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.19G193400.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1871641e-178AC187164.9 Glycine max cultivar Williams 82 clone gmw2-53i18, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006604633.10.0uncharacterized protein LOC100788624 isoform X1
RefseqXP_028216377.10.0uncharacterized protein LOC114398390 isoform X1
TrEMBLA0A445FIP90.0A0A445FIP9_GLYSO; Uncharacterized protein
TrEMBLK7MZ800.0K7MZ80_SOYBN; Uncharacterized protein
STRINGGLYMA19G37801.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF64002834
Representative plantOGRP45691318
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19490.14e-42bZIP family protein