PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.19G177400.1.p
Common NameGLYMA_19G177400, Glyma19g36100.1, LOC100794069
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family WRKY
Protein Properties Length: 472aa    MW: 52465.4 Da    PI: 8.8352
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.19G177400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY103.71.1e-32195251360
                          -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
                 WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                          DgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers  d+++ ei+Y+geHnh+k
  Glyma.19G177400.1.p 195 DGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSF-DGNIAEIVYKGEHNHSK 251
                          9***************************************.***************85 PP
2WRKY102.42.6e-32390447259
                          --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                           Dg++WrKYGqK+vkg+++prsYYrCt  +C+v+k+ver+ +dp+ +++tYeg+Hnhe
  Glyma.19G177400.1.p 390 GDGFRWRKYGQKVVKGNPYPRSYYRCTNIKCNVRKHVERAIDDPRSFVTTYEGKHNHE 447
                          5********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.8E-29180252IPR003657WRKY domain
SuperFamilySSF1182901.96E-25192252IPR003657WRKY domain
SMARTSM007748.0E-37193251IPR003657WRKY domain
PfamPF031063.3E-25195249IPR003657WRKY domain
PROSITE profilePS5081123.617195252IPR003657WRKY domain
Gene3DG3DSA:2.20.25.808.1E-33375449IPR003657WRKY domain
SuperFamilySSF1182902.22E-28382449IPR003657WRKY domain
PROSITE profilePS5081133.947384449IPR003657WRKY domain
SMARTSM007741.1E-37389448IPR003657WRKY domain
PfamPF031062.6E-25391447IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009957Biological Processepidermal cell fate specification
GO:0010214Biological Processseed coat development
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 472 aa     Download sequence    Send to blast
MHIKEAERVV IAKPVASRPT CSTFKSFSEL LAGAINASPA IPSSQTTVSA IRPKTVRFKP  60
AMNQPPSGFV FSQADTFGAA LDNSSEMSPK LDTKQSLIYK PTAKLVSKTT VSLLANMGNC  120
STSRQQTQQP MEANFQHSIH EKFRTNTSSN LDQSITPQTE INYQSSEPSK MVQQNIEEDQ  180
KVLTSSVNCD RPSYDGYNWR KYGQKQVKGS EYPRSYYKCT HPNCPVKKKV ERSFDGNIAE  240
IVYKGEHNHS KPQLHKRNSA AGTQGSGVVS DGIVQDMWSN SHSERNEGNE VRIENTGLSM  300
HSDYYVKVPR PNDSALNVGA TNAGGVSTEN SCGLSGECEE GSKGFEAQED EPRYKRRKNE  360
NQSNEAALSE EGLVEPRIVM QSFMDSEILG DGFRWRKYGQ KVVKGNPYPR SYYRCTNIKC  420
NVRKHVERAI DDPRSFVTTY EGKHNHEMPL KNTGTVASER DSQASLSKDK A*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A6e-31195449877Probable WRKY transcription factor 4
2lex_A6e-31195449877Probable WRKY transcription factor 4
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.332100.0flower
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.19G177400.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0312420.0KT031242.1 Glycine max clone HN_CCL_24 WRKY transcription factor (Glyma19g36100.1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001304597.10.0WRKY transcription factor 44-like
RefseqXP_003554351.10.0WRKY transcription factor 44-like isoform X1
RefseqXP_025982735.10.0WRKY transcription factor 44-like isoform X1
RefseqXP_028215930.10.0WRKY transcription factor 44-like
TrEMBLA0A445FI030.0A0A445FI03_GLYSO; WRKY transcription factor 44
TrEMBLI1NA430.0I1NA43_SOYBN; WRKY transcription factor
STRINGGLYMA19G36100.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF67903450
Representative plantOGRP10259810
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37260.11e-107WRKY family protein
Publications ? help Back to Top
  1. Chai C, et al.
    Soybean transcription factor ORFeome associated with drought resistance: a valuable resource to accelerate research on abiotic stress resistance.
    BMC Genomics, 2015. 16: p. 596
    [PMID:26268547]