PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.19G145300.1.p
Common NameGLYMA_19G145300, LOC100799713
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 492aa    MW: 55358.4 Da    PI: 8.7073
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.19G145300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.31.1e-10200229534
                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeek 34 
                          k  rr+++NReAAr+sR+RKka++++Le  
  Glyma.19G145300.1.p 200 KTLRRLAQNREAARKSRLRKKAYVQQLESS 229
                          7789***********************974 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1707.2E-9194242No hitNo description
SMARTSM003381.2E-7196269IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.22198242IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.88E-7200242No hitNo description
PfamPF001707.5E-8200233IPR004827Basic-leucine zipper domain
PROSITE patternPS000360203218IPR004827Basic-leucine zipper domain
PfamPF141446.9E-32292365IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 492 aa     Download sequence    Send to blast
MASSKTTNPT TTTTQLEPLP PPQQRHPPPP HHQLQQHHHH HHHHQQIHDH HQISFGMMQS  60
SSSFSSIPGN YLRSKDSGAY DLGELDQAFF LYLDGQADPS SVQDQRQNSS SGMRPPTLNI  120
FPSKPMHVEP SSSKAKANIE LVSPQTSGSK RPSEPSMELA NPRNETASAP QPPKPVKRES  180
NRKGPTSSSE HEGPKTPDPK TLRRLAQNRE AARKSRLRKK AYVQQLESSR IRLNQLEQEL  240
QRARTQGMFL GGGALLGGEQ GLPVTMNTIS TEAAMFDVEY ARWQEEHHRI VCELRAAVQE  300
HLPENELRLF VDNCLAHYDQ VMNLKSLVAK TDVFHLVSGT WKTPAERCFM WIGGFRPSEL  360
IKIIVRQIEP LTEQQILGIC GLQQSTQEAE EALSQGLEAL NQSLSDTITS DSLSYPPNMA  420
NYMGQMAVAM NKLSTLEGFV RQADNQRHQT IHRLHQILTT RQAARCFLAI AEYFHRLRAL  480
SSLWLARPRQ E*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.543170.0seed coat
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Specifically expressed in roots. {ECO:0000269|PubMed:12777042}.
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.19G145300.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006604382.10.0bZIP transcription factor TGA10 isoform X1
RefseqXP_028216015.10.0bZIP transcription factor TGA10-like isoform X1
SwissprotQ52MZ20.0TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A0R0EMF90.0A0A0R0EMF9_SOYBN; Uncharacterized protein
STRINGGLYMA19G32715.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47313455
Representative plantOGRP75161218
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-173bZIP family protein