PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Glyma.17G253200.1.p | ||||||||
Common Name | GLYMA_17G253200 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | bZIP | ||||||||
Protein Properties | Length: 193aa MW: 22142.3 Da PI: 10.2754 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 36 | 1.5e-11 | 60 | 119 | 4 | 63 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++ +rkq+NRe+ArrsR RK++ ++ L v+ L+++ + k+++ ++++ k+++e+ Glyma.17G253200.1.p 60 QRKKKRKQSNRESARRSRMRKQKHLDDLIAQVDLLKKQKSLTLKKVNITTQHCLKVEAEN 119 5789***********************************988899999999999998887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.1E-14 | 57 | 121 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.53 | 59 | 122 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.1E-8 | 59 | 112 | No hit | No description |
Pfam | PF00170 | 1.0E-7 | 60 | 115 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 6.19E-10 | 61 | 114 | No hit | No description |
CDD | cd14702 | 2.81E-17 | 62 | 112 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 64 | 79 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence Send to blast |
MSPVLSEILR SGFMINSSLR RRTHLVQSFS VVFLYCGTSS TSILLQSSGS EEDLQLLMEQ 60 RKKKRKQSNR ESARRSRMRK QKHLDDLIAQ VDLLKKQKSL TLKKVNITTQ HCLKVEAENS 120 ILGAQKTELT QSLQSLNDII NLINTTTTSD HNNYYYNNNN NNNNNNFMMN PMHMAYLNQP 180 IVATADNNMF LW* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 60 | 81 | RKKKRKQSNRESARRSRMRKQK |
2 | 73 | 80 | RRSRMRKQ |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Gma.15870 | 0.0 | flower| leaf |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Glyma.17G253200.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC235256 | 1e-78 | AC235256.1 Glycine max strain Williams 82 clone GM_WBb0037K19, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003550395.1 | 1e-111 | bZIP transcription factor 11 | ||||
TrEMBL | A0A0R0FII4 | 1e-138 | A0A0R0FII4_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA17G37180.1 | 1e-110 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF613 | 34 | 147 | Representative plant | OGRP551 | 16 | 78 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75390.1 | 4e-27 | basic leucine-zipper 44 |
Link Out ? help Back to Top | |
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Phytozome | Glyma.17G253200.1.p |