PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Glyma.17G197300.1.p | ||||||||
Common Name | GLYMA_17G197300, LOC102660746 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | bZIP | ||||||||
Protein Properties | Length: 153aa MW: 17173.4 Da PI: 6.5136 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 21 | 7.5e-07 | 8 | 47 | 24 | 63 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 24 KkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++a +eeL++kv++L aeN+ Lk e e ke+++l++ + Glyma.17G197300.1.p 8 FQALCEELTRKVATLVAENENLKREKELALKEYESLETTN 47 699********************************99876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 153 aa Download sequence Send to blast |
MSVYIKMFQA LCEELTRKVA TLVAENENLK REKELALKEY ESLETTNKNL KTQIAKSINT 60 EVEKTPVEPV SSVAEITPSS GNGPWFLYNH FPVPQIFWPS ILQSSNPIHL QNTSFNSIAI 120 PPNANVSCSS ESESHHKQNN LINDNRTRVI TF* |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Gma.691 | 1e-159 | cotyledon| leaf| somatic embryo| stem |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Glyma.17G197300.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC187164 | 1e-127 | AC187164.9 Glycine max cultivar Williams 82 clone gmw2-53i18, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006604633.1 | 2e-90 | uncharacterized protein LOC100788624 isoform X1 | ||||
Refseq | XP_006604635.1 | 1e-90 | uncharacterized protein LOC100788624 isoform X3 | ||||
Refseq | XP_028216377.1 | 2e-90 | uncharacterized protein LOC114398390 isoform X1 | ||||
Refseq | XP_028216378.1 | 1e-90 | uncharacterized protein LOC114398390 isoform X2 | ||||
TrEMBL | A0A0R0FFB1 | 1e-106 | A0A0R0FFB1_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA17G29170.1 | 1e-100 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF6400 | 28 | 34 | Representative plant | OGRP4569 | 13 | 18 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19490.1 | 2e-25 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Glyma.17G197300.1.p |
Entrez Gene | 102660746 |