PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Glyma.15G031800.1.p | ||||||||
Common Name | GLYMA_15G031800, LOC100812970 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | EIL | ||||||||
Protein Properties | Length: 591aa MW: 66129.1 Da PI: 6.0035 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 438.7 | 5.1e-134 | 38 | 363 | 1 | 323 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasds 90 eel++rmwkd+++lkrlke++k e+++a ++++k ++s++qarrkkmsraQDgiLkYMlk mevc+a+GfvYgiipekgkpv+g+sd+ Glyma.15G031800.1.p 38 EELERRMWKDRIKLKRLKEKQKL--EAQQA-AEKQKPRQSSDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGSSDN 124 8****************999986..45665.99********************************************************* PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HH CS EIN3 91 LraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelw 180 +raWWkekv+fd+ngpaai+ky+a++l++s+++++ ++ ++++ l++lqD+tlgSLLs+lmqhcdppqr++plekg++pPWWPtG+e+w Glyma.15G031800.1.p 125 IRAWWKEKVRFDKNGPAAIAKYEADCLAMSEADNS--RNGNSQSILQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGIPPPWWPTGNEDW 212 ******************************99988..78999999********************************************* PP HHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX..... CS EIN3 181 wgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss..... 265 w++l l++ q+ ppykkphdlkk+wkv+vLtavikhmsp+i++ir+++rqsk+lqdkm+akes+++l vl++ee+++++ s+++ Glyma.15G031800.1.p 213 WSQLNLPHGQS-PPYKKPHDLKKMWKVGVLTAVIKHMSPNIAKIRRHVRQSKCLQDKMTAKESAIWLGVLSREEALIRQPSSDNGtsgit 301 **********9.9**********************************************************************4445677 PP ....XXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 266 ....slrkqspkvtlsceqkedvegkkeskikhvqavkttagfpvvrkrkkkpsesakvssk 323 + ++++ s+ +++dv+g+++ + +++++++++f v++ ++ ++ ++ v+++ Glyma.15G031800.1.p 302 gvppGVPVENKQAATSSASNYDVDGTDDGIGSVSSKENRRNHFMVTEPSDNLRRGRKPVQDT 363 7776444488888888999*****99999999999999999777776555444433333333 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 4.8E-127 | 38 | 285 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 1.7E-71 | 160 | 293 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 7.98E-62 | 166 | 289 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 591 aa Download sequence Send to blast |
MGEIEEIGAD VCSDIEVDDI RCPNIAEKDV SDEEIEAEEL ERRMWKDRIK LKRLKEKQKL 60 EAQQAAEKQK PRQSSDQARR KKMSRAQDGI LKYMLKLMEV CKARGFVYGI IPEKGKPVSG 120 SSDNIRAWWK EKVRFDKNGP AAIAKYEADC LAMSEADNSR NGNSQSILQD LQDATLGSLL 180 SSLMQHCDPP QRKYPLEKGI PPPWWPTGNE DWWSQLNLPH GQSPPYKKPH DLKKMWKVGV 240 LTAVIKHMSP NIAKIRRHVR QSKCLQDKMT AKESAIWLGV LSREEALIRQ PSSDNGTSGI 300 TGVPPGVPVE NKQAATSSAS NYDVDGTDDG IGSVSSKENR RNHFMVTEPS DNLRRGRKPV 360 QDTDQSEKQP RPKKPRRAND KPPAQADNEI LHVEPRSKGI NINQTEAQVV GVQIHGNEQS 420 NETDSAARPL ERGLEVPAQL PVPEVDQYSY LHTNNLVSSE SMYMSGKPMH YPELQNPDMH 480 HETTYNLYNP AAGYEPGQDG QQLHSANNEA VRLENDAVSL QGVHMKGDGI NGGDLQYFGK 540 DAFQNELDRP MDHSFFGSPL SMSLDFGALG SPFHLDDFVC EDEMIQYFGA * |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wij_A | 1e-73 | 165 | 296 | 9 | 140 | ETHYLENE-INSENSITIVE3-like 3 protein |
Search in ModeBase |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Gma.29350 | 0.0 | epicotyl| leaf| seed coat| stem |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Glyma.15G031800.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP015040 | 0.0 | AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006597241.1 | 0.0 | ETHYLENE INSENSITIVE 3-like 3 protein | ||||
Refseq | XP_028203921.1 | 0.0 | ETHYLENE INSENSITIVE 3-like 3 protein | ||||
Swissprot | O23116 | 0.0 | EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein | ||||
TrEMBL | A0A0R0G3K8 | 0.0 | A0A0R0G3K8_SOYBN; Uncharacterized protein | ||||
TrEMBL | A0A445GNJ6 | 0.0 | A0A445GNJ6_GLYSO; ETHYLENE INSENSITIVE 3-like 3 protein isoform A | ||||
STRING | GLYMA15G03650.1 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF322 | 34 | 200 | Representative plant | OGRP563 | 16 | 82 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G73730.1 | 1e-173 | ETHYLENE-INSENSITIVE3-like 3 |
Link Out ? help Back to Top | |
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Phytozome | Glyma.15G031800.1.p |
Entrez Gene | 100812970 |
Publications ? help Back to Top | |||
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