PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.14G167000.1.p
Common NameGLYMA_14G167000, LOC100775882
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 371aa    MW: 41888.8 Da    PI: 8.3179
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.14G167000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1346.4e-1176106333
                          XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLee 33 
                          + k+ rr ++NReAAr++R+RKka++++Le+
  Glyma.14G167000.1.p  76 DTKALRRQAQNREAARKCRLRKKAYVQQLET 106
                          67999************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1706.8E-870122No hitNo description
SMARTSM003380.003174134IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.7676111IPR004827Basic-leucine zipper domain
PfamPF001702.0E-876112IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.38E-778118No hitNo description
PROSITE patternPS0003608196IPR004827Basic-leucine zipper domain
PfamPF141442.5E-28167240IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    Send to blast
MNSSSTQLVL TKRMGIYDPF HQVNMWGDSF KIDGSLNSIA PQMLMIKPSM RNKSECTPHE  60
SREPSGDDQE TNDKADTKAL RRQAQNREAA RKCRLRKKAY VQQLETSRVK LMQLELEIEK  120
ARKQGMYIRR ALDVSYMGSS ATVNPARITL FELEYGQWIE EQDRQNQELR NALQTQASEM  180
QLHLLVESCL SHYSNLFRMK AEAAKADVFY LISGAWKASV ERLFLWIGGS RPSQLLNIIA  240
PQLEPLTDQQ IVSISNLRLS SQQAEDALSL GLDKLQQSLV HNIPSDPLVV GHYGFEMAAA  300
MDKGEALEGF VNQADHLRQQ TLIHMSRILT TGQAAKGLLA MGEYFHRLRT LSSLWTARSC  360
DPSFPTQLSN *
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.249000.0hypocotyl| root| seed coat| stem
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1 (By similarity). {ECO:0000250, ECO:0000269|PubMed:12953119}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.14G167000.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0917830.0BT091783.1 Soybean clone JCVI-FLGm-8F18 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025981346.10.0transcription factor TGA7 isoform X1
SwissprotQ93ZE21e-132TGA7_ARATH; Transcription factor TGA7
TrEMBLI1MAN90.0I1MAN9_SOYBN; Uncharacterized protein
STRINGGLYMA14G33800.60.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF109634104
Representative plantOGRP26791132
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77920.11e-135bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]