PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Glyma.14G071400.1.p

Common Name

GLYMA_14G071400, LOC100101889

Organism

Glycine max

Taxonomic ID

3847

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja

Family

bZIP

Protein Properties

Length: 167aa MW: 19332.8 Da PI: 9.3282

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Glyma.14G071400.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	35.8	1.7e-11	30	89	4	63
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++ +rkq+NRe+ArrsR RK++ ++ L v+ L+++ + +++ +k++ ++k+e+ Glyma.14G071400.1.p 30 QRKKKRKQSNRESARRSRMRKQKHLDDLIAQVDHLKKQKSLTLMKVDITTKHYLEVKAEN 89 5789**********************************9866678888888888888776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.3E-14	27	91	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	1.7E-8	29	75	No hit	No description
PROSITE profile	PS50217	9.852	29	92	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	2.4E-8	30	89	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.37E-10	31	86	No hit	No description
CDD	cd14702	1.92E-16	32	82	No hit	No description
PROSITE pattern	PS00036	0	34	49	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 167 aa Download sequence Send to blast
MASSSGTSSM SNILLQSSSS EEDLQLLMEQ RKKKRKQSNR ESARRSRMRK QKHLDDLIAQ 60 VDHLKKQKSL TLMKVDITTK HYLEVKAENS ILWAQKTELT QSLQSLNDII DLINTTNGVY 120 HTDCYDINNH NNHNNYYNNN NNFMNPMHMA YLNQPIVATA DNMFLW*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	30	51	RKKKRKQSNRESARRSRMRKQK
2	43	50	RRSRMRKQ

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Gma.24886	0.0	root\| seed coat

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Glyma.14G071400.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_003544335.1	1e-120	bZIP transcription factor 11
TrEMBL	I1M889	1e-118	I1M889_SOYBN; Uncharacterized protein
STRING	GLYMA14G07800.1	1e-119	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF613	34	147
Representative plant	OGRP551	16	78

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75390.1	7e-40	basic leucine-zipper 44

Link Out ? help Back to Top
Phytozome	Glyma.14G071400.1.p
Entrez Gene	100101889

Publications ? help Back to Top
Liao Y, et al. Soybean GmbZIP44, GmbZIP62 and GmbZIP78 genes function as negative regulator of ABA signaling and confer salt and freezing tolerance in transgenic Arabidopsis. Planta, 2008. 228(2): p. 225-40 [PMID:18365246]