PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.14G009200.1.p
Common NameGLYMA_14G009200, LOC100807240
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family SAP
Protein Properties Length: 478aa    MW: 52870.6 Da    PI: 8.2217
Description SAP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.14G009200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SAP729.33.5e-22214751455
                  SAP   1 mssssssssseseegseggeggdass..............geseg..psssrqraanevwpePflealatqvaidasrslGrlaaasala 74 
                          mss+ssssss+s+++s  ++++da +              g++e+  +ss+rqra+nev+pePflealatq+a+da++++Grl+aasala
  Glyma.14G009200.1.p   1 MSSTSSSSSSSSSTSS--STPYDAVApdipgpstrrttrsGQFEAssSSSQRQRAMNEVLPEPFLEALATQLALDAANYNGRLSAASALA 88 
                          8888887777666554..6777777777999*********66665115667888************************************ PP

                  SAP  75 nvfqvcstwravsrsdllwqrltrriWrrtkllrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadvdedndadalsCrclalsdkyla 164
                          ++fqvcstwr+vsrsdllwqrltrriWrrt++lr+tW+ ey+y+hrtarnf+t+r++++++ + ++  ++++  ++l+Crclalsd++la
  Glyma.14G009200.1.p  89 ILFQVCSTWREVSRSDLLWQRLTRRIWRRTYRLRATWQLEYMYWHRTARNFSTGRHRFFDPPVFDP--SDHHLLQNLLCRCLALSDTHLA 176
                          ************************************************************987776..4567789*************** PP

                  SAP 165 aGfadGavrlfdletrlhvstflpqhrdrlGrfsravsGivisdsrlvfatldGdihvavidgag..aaaarrallGdvvndGalvdfaG 252
                          +Gf+dG+vrlfdletr+hv+tfl+ h++++G+fsr+vsGivi +s+++fa+ldGdi+v++++g+g   ++arra+ Gdvvn+G+lv faG
  Glyma.14G009200.1.p 177 CGFVDGTVRLFDLETRAHVTTFLSLHGHLFGPFSRSVSGIVIFNSNIAFARLDGDIYVDNVNGPGpgPSQARRAVEGDVVNNGVLVGFAG 266
                          **************************************************************998557899******************* PP

                  SAP 253 sgrWwvGlyaGvpGrafhiWdaeteelvfvGGsltdPeavmGWhmlteltelvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeer 342
                          +grWwvGl+aG++Graf+iWda++ee+vfvGGsltdPe+vmGWhmltel+e+vGrvrvtere++vaCt +rlv+f++rn++v+lr++ ++
  Glyma.14G009200.1.p 267 TGRWWVGLFAGIAGRAFQIWDARSEERVFVGGSLTDPETVMGWHMLTELVEAVGRVRVTEREYVVACTGSRLVCFSFRNPEVLLRDVGST 356
                          ****************************************************************************************** PP

                  SAP 343 rGlivssldasneayvvvdsrGvatvrrvenleevcrfrvrg..aqrgvlgCvnggyalvyagg...vlrvWeiekkeg.ylyslrervg 426
                          +G++vssldas+eayvvv+++Gv+tvrrv++le+++rfr+++  + +g+++C+n+gyal+y+++    lrvW+ie+++g ++++l  r+g
  Glyma.14G009200.1.p 357 TGFVVSSLDASQEAYVVVERNGVGTVRRVSTLERLSRFRLNRllWVQGLWACMNLGYALTYSPSpspSLRVWDIEQAIGrLCVTLGLRAG 446
                          ******************************************9*******************999999*********999********** PP

                  SAP 427 evnalvaddrhvavsssdgtihlldfgaq 455
                          e+n++va+drhva+ss+d++i+lldfg+q
  Glyma.14G009200.1.p 447 ELNSFVANDRHVAISSNDNNINLLDFGVQ 475
                          ***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF813832.83E-780134IPR001810F-box domain
Gene3DG3DSA:1.20.1280.502.3E-686145No hitNo description
SuperFamilySSF509781.72E-11164360IPR017986WD40-repeat-containing domain
Gene3DG3DSA:2.130.10.102.4E-8165230IPR015943WD40/YVTN repeat-like-containing domain
SuperFamilySSF509781.72E-11413469IPR017986WD40-repeat-containing domain
Gene3DG3DSA:2.130.10.102.4E-8424472IPR015943WD40/YVTN repeat-like-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 478 aa     Download sequence    Send to blast
MSSTSSSSSS SSSTSSSTPY DAVAPDIPGP STRRTTRSGQ FEASSSSSQR QRAMNEVLPE  60
PFLEALATQL ALDAANYNGR LSAASALAIL FQVCSTWREV SRSDLLWQRL TRRIWRRTYR  120
LRATWQLEYM YWHRTARNFS TGRHRFFDPP VFDPSDHHLL QNLLCRCLAL SDTHLACGFV  180
DGTVRLFDLE TRAHVTTFLS LHGHLFGPFS RSVSGIVIFN SNIAFARLDG DIYVDNVNGP  240
GPGPSQARRA VEGDVVNNGV LVGFAGTGRW WVGLFAGIAG RAFQIWDARS EERVFVGGSL  300
TDPETVMGWH MLTELVEAVG RVRVTEREYV VACTGSRLVC FSFRNPEVLL RDVGSTTGFV  360
VSSLDASQEA YVVVERNGVG TVRRVSTLER LSRFRLNRLL WVQGLWACMN LGYALTYSPS  420
PSPSLRVWDI EQAIGRLCVT LGLRAGELNS FVANDRHVAI SSNDNNINLL DFGVQDP*
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.14G009200.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003545076.10.0transcriptional regulator STERILE APETALA
RefseqXP_028200255.10.0transcriptional regulator STERILE APETALA-like
TrEMBLA0A445GZT70.0A0A445GZT7_GLYSO; Transcriptional regulator STERILE APETALA
TrEMBLK7M4980.0K7M498_SOYBN; Uncharacterized protein
STRINGGLYMA14G01280.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF76873146
Representative plantOGRP9756912
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35770.11e-105SAP family protein