PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.13G342500.1.p
Common NameGLYMA_13G342500, LOC100807406
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family EIL
Protein Properties Length: 592aa    MW: 66052.9 Da    PI: 6.0283
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.13G342500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3438.94.7e-134383601303
                          XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                 EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasds 90 
                          eel++rmwkd+++lkrlke++k   e+++a ++++k ++s++qarrkkmsraQDgiLkYMlk mevc+a+GfvYgiipekgkpv+g+sd+
  Glyma.13G342500.1.p  38 EELERRMWKDRIKLKRLKEKQKL--EAQQA-AEKQKPRQSSDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGSSDN 124
                          8****************999986..45665.99********************************************************* PP

                          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HH CS
                 EIN3  91 LraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelw 180
                          +raWWkekv+fd+ngpaai+ky+a++l++s+++++  ++ ++++ l++lqD+tlgSLLsalmqhcdppqr++plekg++pPWWP+G+e+w
  Glyma.13G342500.1.p 125 IRAWWKEKVRFDKNGPAAIAKYEADCLAMSEADNS--RNGNSQSILQDLQDATLGSLLSALMQHCDPPQRKYPLEKGIPPPWWPNGNEDW 212
                          ******************************99988..78999999********************************************* PP

                          HHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX..... CS
                 EIN3 181 wgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss..... 265
                          w++l l++ q+ ppykkphdlkk+wkv+vLtavikhmsp+i++ir+++rqsk+lqdkm+akes+++l vl+qee+++++ s+++      
  Glyma.13G342500.1.p 213 WSQLNLPHGQS-PPYKKPHDLKKMWKVGVLTAVIKHMSPNIAKIRKHVRQSKCLQDKMTAKESAIWLGVLSQEEALIRQPSSDNGtsgit 301
                          **********9.9**********************************************************************4445677 PP

                          ....XXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX.................X CS
                 EIN3 266 ....slrkqspkvtlsceqkedvegkkeskikhvqavktta.................g 303
                               +  ++++   s+ +++dv+g+++   + ++++++++                 g
  Glyma.13G342500.1.p 302 gvppGVPVENRQAATSSASNYDVDGTDDGIGSVSSKENRRNqfmdtepsdnlrrvrksG 360
                          77764444788888888889****88888888888888877556555555444444441 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048733.6E-12738285No hitNo description
Gene3DG3DSA:1.10.3180.101.4E-71160293IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167689.68E-62166289IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009873Biological Processethylene-activated signaling pathway
GO:0042762Biological Processregulation of sulfur metabolic process
GO:0071281Biological Processcellular response to iron ion
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 592 aa     Download sequence    Send to blast
MGEMEEIGAD VCSDIEVDDI RCPNIAEKDV SDEEIEAEEL ERRMWKDRIK LKRLKEKQKL  60
EAQQAAEKQK PRQSSDQARR KKMSRAQDGI LKYMLKLMEV CKARGFVYGI IPEKGKPVSG  120
SSDNIRAWWK EKVRFDKNGP AAIAKYEADC LAMSEADNSR NGNSQSILQD LQDATLGSLL  180
SALMQHCDPP QRKYPLEKGI PPPWWPNGNE DWWSQLNLPH GQSPPYKKPH DLKKMWKVGV  240
LTAVIKHMSP NIAKIRKHVR QSKCLQDKMT AKESAIWLGV LSQEEALIRQ PSSDNGTSGI  300
TGVPPGVPVE NRQAATSSAS NYDVDGTDDG IGSVSSKENR RNQFMDTEPS DNLRRVRKSG  360
QDTDQAKKQP RPKKPRRAND KPPAQSDNEI SLVEPRSNGL NMNPTEAQMG GVQIHGNEQS  420
NETDSAARPL ERGLEVSAQL PAPEVDHYSY LHTNNLISSA SMYMSGRPMH YPELQNPDMH  480
HETTYNLYNP AAGYEPGQDG QQLHSANNEA VRPENVVVSL QGVHMKGDGI NGGDLQYFGK  540
DAFQNDLDRP MDHSFFGSPL SSMSLDFGGL GSPFHLDDFM CDDEMIQYFG A*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A1e-721652969140ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.227210.0leaf| meristem| root| seed coat
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00233DAPTransfer from AT1G73730Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.13G342500.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150400.0AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003543551.10.0ETHYLENE INSENSITIVE 3-like 3 protein
RefseqXP_025980990.10.0ETHYLENE INSENSITIVE 3-like 3 protein
SwissprotO231160.0EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBLK7M3I60.0K7M3I6_SOYBN; Uncharacterized protein
STRINGGLYMA13G41751.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32234200
Representative plantOGRP5631682
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.11e-176ETHYLENE-INSENSITIVE3-like 3
Publications ? help Back to Top
  1. Frerigmann H,Gigolashvili T
    Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency.
    Front Plant Sci, 2014. 5: p. 626
    [PMID:25426131]
  2. Zheng ZL,Zhang B,Leustek T
    Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing.
    Front Plant Sci, 2014. 5: p. 710
    [PMID:25566284]
  3. Panda SK,Sunkar R
    Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling.
    Plant Signal Behav, 2015. 10(4): p. e1010916
    [PMID:25912823]
  4. Wawrzyńska A,Sirko A
    EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor.
    Plant Sci., 2016. 253: p. 50-57
    [PMID:27968996]