PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.13G292800.1.p
Common NameGLYMA_13G292800, LOC100815433
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 312aa    MW: 35570.7 Da    PI: 6.7423
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.13G292800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.78e-11182225548
                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                          kr +r   NR +A+rsR RK+++i eLe+ v +L+ae + L  +
  Glyma.13G292800.1.p 182 KRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPR 225
                          899*********************************98877655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.8E-14178242IPR004827Basic-leucine zipper domain
PfamPF077162.4E-9179227IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.622180232IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.2E-11182233No hitNo description
SuperFamilySSF579593.78E-11182236No hitNo description
CDDcd147036.37E-23183233No hitNo description
PROSITE patternPS000360185200IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    Send to blast
MTQLPPKIPN MSPSWPDFSS HHQKMQLPPL KSGSNNNYQH NQNPSWVDEF LDFSSARRGA  60
HRRSVSDSIT YLDSPMKCGE NNNNNENEFD KFDDEQFMSM FTDEVVLSGV PLLPPTILSS  120
SNPSSPSDQN FFNDEKEKKE EHHHHQLKNE ADEVESQCKQ EIMQLPNDTN TCSSNERITD  180
PKRVKRILAN RQSAQRSRVR KLQYISELER SVTSLQAEVS VLSPRVAFLD HQRLLLNVDN  240
SALKQRIAAL AQDKIFKDAH QEALKREIER LRQVYHQQSL KKMENAAGSP LPSPKPICDA  300
QTEKEATLLN A*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.286480.0leaf| root
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator. {ECO:0000269|PubMed:17719007}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.13G292800.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0969000.0BT096900.1 Soybean clone JCVI-FLGm-25J24 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003543312.10.0basic leucine zipper 61 isoform X1
SwissprotQ9M2K41e-114BZP61_ARATH; Basic leucine zipper 61
TrEMBLK7M2K90.0K7M2K9_SOYBN; Uncharacterized protein
STRINGGLYMA13G36870.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20113488
Representative plantOGRP12617181
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.11e-106bZIP family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]