PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.13G272500.1.p
Common NameGLYMA_13G272500, LOC100101884
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 321aa    MW: 35802.2 Da    PI: 6.5181
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.13G272500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.13e-11175220550
                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                          kr +r   NR +A+rsR RK+++i eLe+ v +L++e +aL  ++ 
  Glyma.13G272500.1.p 175 KRVKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVA 220
                          8999*********************************999987765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.2E-14171235IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.703173225IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.9E-14175226No hitNo description
PfamPF001707.9E-10175220IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.29E-11175229No hitNo description
CDDcd147035.59E-22176226No hitNo description
PROSITE patternPS000360178193IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    Send to blast
MAQLPPKIPT IPQNWPSFPH QRVPSMANFN PTTSTTTATT TPPPPSWVDE FLDFSSARRG  60
AHRRSASDSI TFLEAPFLDE CRAGFDRLDE DQLISMFSDD IAAASLPPPP PLSSASNPSS  120
PASDQNSSEE KPMEMALDVK PKAETLEEES SYKDEEAAPQ PSAIATCTET VVDPKRVKRI  180
LANRQSAQRS RVRKLQYISE LERSVTTLQT EVSALSPRVA FLDHQRLILN VDNSALKQRI  240
AALAQDKIFK DAHQEALKKE IERLRQIYHQ QNLQKMNSNL QQTTPTSQPQ QQPMQLHHHQ  300
QPIAVSQPLG CKDNKEQLLS *
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.287590.0root| stem
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator. {ECO:0000269|PubMed:17719007}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.13G272500.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003543224.10.0basic leucine zipper 61
SwissprotQ9M2K42e-96BZP61_ARATH; Basic leucine zipper 61
TrEMBLI1M3360.0I1M336_SOYBN; Uncharacterized protein
STRINGGLYMA13G34770.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20113488
Representative plantOGRP12617181
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.12e-82bZIP family protein
Publications ? help Back to Top
  1. Liao Y, et al.
    Soybean GmbZIP44, GmbZIP62 and GmbZIP78 genes function as negative regulator of ABA signaling and confer salt and freezing tolerance in transgenic Arabidopsis.
    Planta, 2008. 228(2): p. 225-40
    [PMID:18365246]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  3. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  4. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]