PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.13G085100.1.p
Common NameGLYMA_13G085100, LOC100526976
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 371aa    MW: 41915.7 Da    PI: 7.6363
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.13G085100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.77.7e-1176106333
                          XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLee 33 
                          + k+ rr ++NReAAr++R+RKka++++Le+
  Glyma.13G085100.1.p  76 DTKALRRQAQNREAARKCRLRKKAYVQQLET 106
                          67999************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.1E-770123No hitNo description
SMARTSM003380.002674141IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.7676111IPR004827Basic-leucine zipper domain
PfamPF001708.5E-876112IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.46E-778111No hitNo description
PROSITE patternPS0003608196IPR004827Basic-leucine zipper domain
PfamPF141441.0E-27167240IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    Send to blast
MNSSSTQLVL TKRMGIYDPF HQVNMWGDSF KIDGSLNSIA PQMLMIKPSM QNKSECTPHE  60
SREPSGDDQE TNEKADTKAL RRQAQNREAA RKCRLRKKAY VQQLETSRVK LMQLELEIEK  120
ARKQQGMYIR SALDVSYMGS SGTINPGITL FELEYAQWIE EQDRQNQELR NTLQTQASEM  180
QLHLLVESCL SHYSNLFRMK AEAAKADVFY LISGAWKASV ERLFLWIGGS RPSQLLNIIA  240
PQLEPLTDQQ IVSINNLRLS SQQAEDALSL GLDKLQQSLV HNIPSDPLAV GHYGFEIAAA  300
MEKGEALERF VNQADHLRQQ TLIHMSRILT TAQAAKGLLA MGEYFHRLRT LSSLWTARSC  360
DPSFPTQLSN *
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.249000.0hypocotyl| root| seed coat| stem
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1 (By similarity). {ECO:0000250, ECO:0000269|PubMed:12953119}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.13G085100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0917830.0BT091783.1 Soybean clone JCVI-FLGm-8F18 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001236753.20.0transcription factor bZIP83
RefseqXP_006593384.10.0transcription factor bZIP83 isoform X1
RefseqXP_006593385.10.0transcription factor bZIP83 isoform X1
RefseqXP_006593387.10.0transcription factor bZIP83 isoform X1
RefseqXP_006593388.10.0transcription factor bZIP83 isoform X1
RefseqXP_006593389.10.0transcription factor bZIP83 isoform X1
RefseqXP_006593390.10.0transcription factor bZIP83 isoform X1
RefseqXP_014620649.10.0transcription factor bZIP83 isoform X1
RefseqXP_014620650.10.0transcription factor bZIP83 isoform X1
RefseqXP_014620651.10.0transcription factor bZIP83 isoform X1
RefseqXP_028195549.10.0transcription factor TGA7-like
RefseqXP_028195550.10.0transcription factor TGA7-like
RefseqXP_028195551.10.0transcription factor TGA7-like
RefseqXP_028195553.10.0transcription factor TGA7-like
RefseqXP_028195554.10.0transcription factor TGA7-like
RefseqXP_028195555.10.0transcription factor TGA7-like
RefseqXP_028195556.10.0transcription factor TGA7-like
RefseqXP_028195557.10.0transcription factor TGA7-like
RefseqXP_028195558.10.0transcription factor TGA7-like
RefseqXP_028195559.10.0transcription factor TGA7-like
SwissprotQ93ZE21e-132TGA7_ARATH; Transcription factor TGA7
TrEMBLA0A0B2QWU70.0A0A0B2QWU7_GLYSO; Transcription factor TGA7
TrEMBLK7LX180.0K7LX18_SOYBN; Uncharacterized protein
STRINGGLYMA13G02351.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF109634104
Representative plantOGRP26791132
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77920.11e-135bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Liao Y, et al.
    Soybean GmbZIP44, GmbZIP62 and GmbZIP78 genes function as negative regulator of ABA signaling and confer salt and freezing tolerance in transgenic Arabidopsis.
    Planta, 2008. 228(2): p. 225-40
    [PMID:18365246]
  3. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]