PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.12G184400.1.p
Common NameGLYMA_12G184400
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 645aa    MW: 73567.3 Da    PI: 9.8665
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.12G184400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_138.62.4e-12562609552
                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 
                          +r+rr+ kNRe+A rsR+R++a++ eLe +   L++eN++Lk++l   
  Glyma.12G184400.1.p 562 RRQRRMLKNRESAARSRARRQAYTVELEAELNLLKEENEKLKQTLADA 609
                          69****************************************776544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF534743.18E-2643222IPR029058Alpha/Beta hydrolase fold
Gene3DG3DSA:3.40.50.18201.5E-3144176IPR029058Alpha/Beta hydrolase fold
PfamPF121467.2E-1071210IPR022742Serine aminopeptidase, S33
SMARTSM003386.5E-11558622IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.243560612IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.06E-9562611No hitNo description
Gene3DG3DSA:1.20.5.1702.8E-11562615No hitNo description
PfamPF001702.4E-10562612IPR004827Basic-leucine zipper domain
PROSITE patternPS000360565580IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0016787Molecular Functionhydrolase activity
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 645 aa     Download sequence    Send to blast
MKRVKHHLKL LTQIPLVQTQ NICRCFCQGT QLSPNHNGSS DDFPVVSPRI KLRDGRHLAY  60
IERGVPKDIA KYKIVIVHGF GSSKEMNFLA PQELIDELGI YLLQYDRAGY GESDPNPKRS  120
LKSEALDIQE LADQLQLGPQ FYVIGVSMGS YATWSCLKYL PHRLAGLALI APVINYRWPS  180
FPKRLIREDY RRKLVQWCMW LANHWPRLLH WWVTQKWLPS TAVIEKNPAF FNKSDVDILK  240
TIPGFPMLTK DSLREKAVFD TLRHDWRVAF GKWEFDPMKL SNPFPHNTEF RFSLLFLFRL  300
FQELAPLSTH MSLQQPNQEV PLQEPEATFS QLSKQNSILS LTLDEFYCKN GKSLGSMNMD  360
EFLSSIWNSD DNNQVNPSLP TLDEAAKGKS VVATEPTTIS QPLSVPPPIC KKTVDEIWSQ  420
IHKSQPHYNE ANNSLARNEP LLKRQQTLGE MTLEDFLVKA GVVQESSSLF KSSLLYQNQI  480
GNIASNGPLS ASYRFRHVIG TGSSVSCNGL ETQNMLAQNN NLVIKDVTTN GAVEKCPSLG  540
ESSGKGNRKR IIDGPPEVVV ERRQRRMLKN RESAARSRAR RQAYTVELEA ELNLLKEENE  600
KLKQTLADAE RKRKQEISQR KHTTMAQKRT EKLRSMKRPL SASW*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.596250.0seed coat
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.12G184400.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2352340.0AC235234.1 Glycine max strain Williams 82 clone GM_WBb0028B23, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001357879.10.0bZIP domain-containing protein
RefseqXP_028193878.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 1
TrEMBLA0A445HS620.0A0A445HS62_GLYSO; ABSCISIC ACID-INSENSITIVE 5-like protein 1 isoform A
TrEMBLK7LVQ80.0K7LVQ8_SOYBN; Uncharacterized protein
STRINGGLYMA12G30975.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20923374
Representative plantOGRP1377423
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44460.12e-44bZIP family protein