PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.12G121000.1.p
Common NameGLYMA_12G121000, LOC100101873
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 331aa    MW: 37158.1 Da    PI: 6.3573
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.12G121000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.68.8e-11196239548
                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                          kr +r   NR +A+rsR RK+++i eLe+ v +L+ae + L  +
  Glyma.12G121000.1.p 196 KRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPR 239
                          899*********************************98877655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.8E-14192256IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.622194246IPR004827Basic-leucine zipper domain
PfamPF001702.7E-9196239IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.1E-13196247No hitNo description
SuperFamilySSF579594.34E-11196250No hitNo description
CDDcd147036.78E-22197247No hitNo description
PROSITE patternPS000360199214IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    Send to blast
MAQLPPKIPN MTPNWPDFSS LHQKMPSLQT TSSNQNPSWV DEILEFSVAR RGAPRRSVSD  60
SVTFLEAPLL DHHHCKGGSV VGGGGGNNEF ERFDDEQFMS MFSDEASGNN NNNNTMMAHT  120
LSSSNPSTPS DHNSINDEKE MENKEEEEKK QLKNESEDED KSQCKQEITQ LPNNDDSNNT  180
SNANATCSSE KITDPKRVKR ILANRQSAQR SRVRKLQYIS ELERSVTSLQ AEVSVLSPRV  240
AFLDHQRLLL NVDNSALKQR IAALAQDKIF KDAHQEALKR EIERLRQVYH QQNIKKMDNN  300
AAASPPSQSP SPSPKPRCET HTEKEQLINV *
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.326050.0flower| root
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator. {ECO:0000269|PubMed:17719007}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.12G121000.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001345648.10.0bZIP transcription factor 48
SwissprotQ9M2K41e-117BZP61_ARATH; Basic leucine zipper 61
TrEMBLI1LSA00.0I1LSA0_SOYBN; Uncharacterized protein
STRINGGLYMA12G14130.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20113488
Representative plantOGRP12617181
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.11e-111bZIP family protein
Publications ? help Back to Top
  1. Liao Y, et al.
    Soybean GmbZIP44, GmbZIP62 and GmbZIP78 genes function as negative regulator of ABA signaling and confer salt and freezing tolerance in transgenic Arabidopsis.
    Planta, 2008. 228(2): p. 225-40
    [PMID:18365246]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  3. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  4. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]