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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Glyma.12G018100.1.p |
| Common Name | GLYMA_12G018100, LOC100800989 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
GRAS |
| Protein Properties |
Length: 482aa MW: 53805.8 Da PI: 4.8838 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.12G018100.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 329.5 | 6.5e-101 | 119 | 481 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPil 91
++L ecA + + +a + L+rl++ +s++g+p++R+ +yf +AL++++ + + ++ ++++ +e + ++k++++++P+
Glyma.12G018100.1.p 119 LKALSECASLS-ETEPDQAAESLSRLRKSVSQHGNPTERVGFYFWQALSRKMWG------D---KEKMEPSSWEELTLSYKALNDACPYS 198
67899***955.5577778889********************************......3...333334447899999*********** PP
GRAS 92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfef 178
kf+hltaNqaIlea+e+++ +Hi+Df+i qG+QW+aLlqa+a+R++g+p ++ i g+ + + g +l++tg+rL++fA+ l+++f f
Glyma.12G018100.1.p 199 KFAHLTANQAILEATENASNIHILDFGIVQGIQWAALLQAFATRASGKPnKITISGIPAVSLGpsPGPSLSATGNRLSDFARLLDLNFVF 288
*********************************************777769*******988889899*********************** PP
GRAS 179 nvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalf 268
++ + + +++l+ +++ ++p+E+laVn++lql++llde+ s + + L+l ksl+P++v++ e ea+ ++ F++rf a++y+sa+f
Glyma.12G018100.1.p 289 TP-ILTPIHQLDHNSFCIDPNEVLAVNFMLQLYNLLDEPPSAVD---TALRLAKSLNPRIVTLGEYEASVTRVGFVNRFRTAFKYFSAVF 374
**.799******************************99999888...******************************************* PP
GRAS 269 dsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveee..s 355
+sle +l+++s er vE llgr+i v+ + e +e +e+Wr +e+aGF++v+ls++a +qak ll +++ s +++ e+
Glyma.12G018100.1.p 375 ESLEPNLAADSPERFQVESLLLGRRIAAVIGPGPVR--ESMEDKEQWRVLMERAGFESVSLSHYAISQAKILLWNYSySSLFSLVESkpP 462
******************************999887..9**************************************9999*99987334 PP
GRAS 356 gslvlgWkdrpLvsvSaWr 374
g l l Wkd pL++vS+Wr
Glyma.12G018100.1.p 463 GFLSLAWKDVPLLTVSSWR 481
5566**************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 482 aa
Download sequence Send
to blast |
MAYMCADSGN LMAIAQQVIK QKQQQEQQKQ QQQQQTNPIP WNSTPPLPPT DFPDPFQSDP 60
PFHFQPFRFS DFDSDDWMDS LIATPSSYTT DFPFPSSDLN RLIFPPQSPD SDSPQQPLLK 120
ALSECASLSE TEPDQAAESL SRLRKSVSQH GNPTERVGFY FWQALSRKMW GDKEKMEPSS 180
WEELTLSYKA LNDACPYSKF AHLTANQAIL EATENASNIH ILDFGIVQGI QWAALLQAFA 240
TRASGKPNKI TISGIPAVSL GPSPGPSLSA TGNRLSDFAR LLDLNFVFTP ILTPIHQLDH 300
NSFCIDPNEV LAVNFMLQLY NLLDEPPSAV DTALRLAKSL NPRIVTLGEY EASVTRVGFV 360
NRFRTAFKYF SAVFESLEPN LAADSPERFQ VESLLLGRRI AAVIGPGPVR ESMEDKEQWR 420
VLMERAGFES VSLSHYAISQ AKILLWNYSY SSLFSLVESK PPGFLSLAWK DVPLLTVSSW 480
R*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor involved in plant development (By similarity). Involved in environmental abiotic stress resistance. May increase the expression of stress-responsive genes (PubMed:20616154). Binds DNA in vitro (By similarity). {ECO:0000250|UniProtKB:Q53K16, ECO:0000250|UniProtKB:Q9SCR0, ECO:0000269|PubMed:20616154}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated by drought and high salt stresses, and down-regulated by gibberellic acid (GA) treatment, but not by plant hormone abscisic acid (ABA) application in leaves. Under the salt treatment, expression is induced quickly, and it peaks at 3 hours. Under the drought treatment, the expression is not induced immediately, but reaches its maximum at 3 hours. Under the GA treatment, the expression becomes weaker within 5 hours. {ECO:0000269|PubMed:20616154}. |
