PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.11G156700.2.p
Common NameGLYMA_11G156700, LOC100813972
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family Trihelix
Protein Properties Length: 342aa    MW: 38251.9 Da    PI: 9.9
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.11G156700.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix53.27.7e-1753138186
             trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                          +W++  v +L+ea++ ++   +r+klk+++We+v+k++     +++  ++++qCk+k+e+++kry+ + ++  +     ss++p++++l+
  Glyma.11G156700.2.p  53 EWSEGAVTTLLEAYEAKWVLRNRAKLKGHDWEDVAKHVsaraNSTKSPKTQTQCKNKIESMKKRYRSESATTADA----SSSWPLYSRLD 138
                          5*************************************87777777888999*****************999984....779*****997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.4E-2051139No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    Send to blast
MEDNNNNNNN KAEKQQDDSS HHHPSLLLPN PNHSTTINNN TKEDHHHRLK RDEWSEGAVT  60
TLLEAYEAKW VLRNRAKLKG HDWEDVAKHV SARANSTKSP KTQTQCKNKI ESMKKRYRSE  120
SATTADASSS WPLYSRLDVL LRGTAPISSS LSPPPIAAAR PIIAAPSSQS PHNQALVLLE  180
PPPSVAPPPI AIAQNSYGSN GVERLLAKED GIGAKSSEHV SNKNPMDSDS STPALYSEKD  240
KVRCNKRKMK SENNKRRRNN NNEDMEIVES IRWLAEMVVR SEQTRMDTMK EIERMRVEAE  300
AKRGEMELKR TEIIANTQLE IAKIFASVNK GVDSSLRIGR S*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.326160.0hypocotyl
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.11G156700.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150401e-100AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003539298.10.0trihelix transcription factor ASIL2
RefseqXP_028187664.10.0trihelix transcription factor ASIL2-like
TrEMBLA0A0B2QJ170.0A0A0B2QJ17_GLYSO; Trihelix transcription factor ASIL2
TrEMBLI1LLG20.0I1LLG2_SOYBN; Uncharacterized protein
STRINGGLYMA11G25570.10.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54390.13e-91sequence-specific DNA binding transcription factors