PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Glyma.10G057400.1.p | ||||||||
Common Name | GLYMA_10G057400, LOC100779699 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | TCP | ||||||||
Protein Properties | Length: 191aa MW: 20193.9 Da PI: 7.043 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 113.7 | 2.5e-35 | 37 | 117 | 2 | 85 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasns 85 +k+ +++++hTkv+gR+RR+R++ +caar+F+L++eLG+ +d++tieWLl+ a+p+i+++tg+++ +a + ss+ ++ s Glyma.10G057400.1.p 37 VVKRPSTKDRHTKVNGRGRRIRMPPLCAARIFQLTRELGHRSDGETIEWLLRHAEPSIIAATGSGTVPAAPV---SSVAPSAPS 117 6799************************************************************88888443...333332222 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03634 | 2.6E-29 | 42 | 119 | IPR005333 | Transcription factor, TCP |
PROSITE profile | PS51369 | 26.994 | 43 | 97 | IPR017887 | Transcription factor TCP subgroup |
Sequence ? help Back to Top |
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Protein Sequence Length: 191 aa Download sequence Send to blast |
MTSQVVLHNN FETQPSVTVT TATNTESPPT APPSLAVVKR PSTKDRHTKV NGRGRRIRMP 60 PLCAARIFQL TRELGHRSDG ETIEWLLRHA EPSIIAATGS GTVPAAPVSS VAPSAPSSEP 120 MVACPVTAVG AQGMFAMAPP QPQPNCRLDL SPPAGLEFAV NGYRHMPFTA LLLQPATAED 180 NQNDESLGEQ * |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Glyma.10G057400.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003537001.1 | 1e-137 | transcription factor TCP11 | ||||
Refseq | XP_028183575.1 | 1e-137 | transcription factor TCP11-like | ||||
Swissprot | Q9SJK7 | 8e-44 | TCP11_ARATH; Transcription factor TCP11 | ||||
TrEMBL | A0A445IIB9 | 1e-136 | A0A445IIB9_GLYSO; Transcription factor TCP11 | ||||
TrEMBL | K7LHN7 | 1e-136 | K7LHN7_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA10G06515.1 | 1e-136 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF3819 | 33 | 63 | Representative plant | OGRP922 | 14 | 59 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37000.1 | 2e-45 | TCP family protein |
Link Out ? help Back to Top | |
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Phytozome | Glyma.10G057400.1.p |
Entrez Gene | 100779699 |