PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.09G004500.1.p
Common NameGLYMA_09G004500, LOC100798980
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family G2-like
Protein Properties Length: 284aa    MW: 31703.6 Da    PI: 9.6552
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.09G004500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like107.48e-3474127255
              G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                          prlrWtp+LH++Fv+av++LGG+++AtPk +l+lm+vkgLt++hvkSHLQ+YR+
  Glyma.09G004500.1.p  74 PRLRWTPDLHRCFVHAVQRLGGEDRATPKLVLQLMNVKGLTISHVKSHLQMYRS 127
                          8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129410.84270130IPR017930Myb domain
Gene3DG3DSA:1.10.10.603.7E-3370129IPR009057Homeodomain-like
SuperFamilySSF466892.51E-1672128IPR009057Homeodomain-like
TIGRFAMsTIGR015575.8E-2574127IPR006447Myb domain, plants
PfamPF002491.5E-975126IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    Send to blast
MKNKKGEALS ETSLPPSTMS SSSSSLVTTL VDNNNPTQPS QLRAARRRFT SDHHLPEISL  60
KTPMVRPYVR SKMPRLRWTP DLHRCFVHAV QRLGGEDRAT PKLVLQLMNV KGLTISHVKS  120
HLQMYRSMRH EQMSQGAKKN NMAPDFPAST LATLGPRQQK PHKRSCTEEL VPTQAQWNHD  180
EQECYNGNQG GESIIICNGN EQKVHSYIIF EGLLRGQSVQ ENKTTTTEKV SLGDAGYESD  240
HQRFQDTTLS LSMSSRPSSH SFLNRSHSTG PDANDVSLEL TLS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A8e-1975130459Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B8e-1975130459Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A7e-1975130358Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B7e-1975130358Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C7e-1975130358Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D7e-1975130358Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A8e-1975130459Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C8e-1975130459Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D8e-1975130459Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F8e-1975130459Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H8e-1975130459Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J8e-1975130459Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.09G004500.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003534706.20.0probable transcription factor KAN2
RefseqXP_028248163.10.0probable transcription factor KAN2
TrEMBLA0A445IUY70.0A0A445IUY7_GLYSO; Putative Myb family transcription factor (Fragment)
STRINGGLYMA09G00685.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF93812840
Representative plantOGRP28515123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02060.18e-34G2-like family protein