PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.07G171600.1.p
Common NameGLYMA_07G171600, Glyma07g26910.1, LOC100818281
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 330aa    MW: 36512.5 Da    PI: 7.7553
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.07G171600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.24.7e-1157105254
                          HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                  HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                          ++ +  rE+ RRdr+N+ f+eL   l ++     +K++Ka+iL+++v+ +k+L
  Glyma.07G171600.1.p  57 KVLKADREKLRRDRLNEHFQELGNALDPD----RPKNDKATILTETVQMLKDL 105
                          566789********************997....79****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.09E-1353125IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.42755105IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.20E-956109No hitNo description
Gene3DG3DSA:4.10.280.101.9E-1256128IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.7E-957105IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.3E-761111IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    Send to blast
MDQRKLRDSS NSKPASDAAP QHVTLTSNRF RNSQAAVRER EKEKGEGENE DPSAARKVLK  60
ADREKLRRDR LNEHFQELGN ALDPDRPKND KATILTETVQ MLKDLTAEVN RLKTEHKTLS  120
EESRELMQEK NELREEKTSL KSDIENLNVQ YQQRVRIMFP WSAIDPSAVI SQPYSYPVPI  180
HIPSAPISIH PSLQPFPFFG NQNPGHIPNP CSMYVPYTTP TSHPPVEPPS MMYASTSHAS  240
NQKESGSKSP GHRRSSGAER SSETDDVVTE LELKMPGSSS TQQGCTSGGR KGKMKDRTII  300
GGSASSQYSS SLGLQDSSNS VGDIPKTDN*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.281570.0leaf| root| seed coat
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed constitutively in roots, leaves, stems, and flowers. {ECO:0000269|PubMed:12679534}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.07G171600.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311100.0KT031110.1 Glycine max clone HN_CCL_213 bHLH transcription factor (Glyma07g26910.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003529225.10.0transcription factor bHLH121 isoform X1
RefseqXP_028240745.10.0transcription factor bHLH121-like isoform X1
SwissprotQ9LT232e-71BH121_ARATH; Transcription factor bHLH121
TrEMBLA0A0B2NWS00.0A0A0B2NWS0_GLYSO; Transcription factor bHLH121
TrEMBLI1KKW80.0I1KKW8_SOYBN; BHLH transcription factor
STRINGGLYMA07G26910.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22823376
Representative plantOGRP34011425
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.18e-66bHLH family protein
Publications ? help Back to Top
  1. Chai C, et al.
    Soybean transcription factor ORFeome associated with drought resistance: a valuable resource to accelerate research on abiotic stress resistance.
    BMC Genomics, 2015. 16: p. 596
    [PMID:26268547]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  3. Min JH, et al.
    Arabidopsis Basic Helix-Loop-Helix 34 (bHLH34) Is Involved in Glucose Signaling through Binding to a GAGA Cis-Element.
    Front Plant Sci, 2017. 8: p. 2100
    [PMID:29321786]