PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.07G114300.1.p
Common NameGLYMA_07G114300, LOC100804762
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family ERF
Protein Properties Length: 241aa    MW: 26365.9 Da    PI: 10.3965
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.07G114300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.43.6e-18121170355
                  AP2   3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                          ++GVr+++ +g+++AeIrd    ng   r++lg++ tae Aa a+++a+ k++g
  Glyma.07G114300.1.p 121 FRGVRRRP-WGKYAAEIRDaK-RNG--VRVWLGTYETAENAALAYDRAAFKMHG 170
                          8*******.**********43.344..**************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103222.682120178IPR001471AP2/ERF domain
SMARTSM003808.9E-36120184IPR001471AP2/ERF domain
CDDcd000184.20E-28121180No hitNo description
Gene3DG3DSA:3.30.730.102.2E-30121179IPR001471AP2/ERF domain
PRINTSPR003677.6E-10121132IPR001471AP2/ERF domain
SuperFamilySSF541713.53E-22121179IPR016177DNA-binding domain
PfamPF008472.7E-13121170IPR001471AP2/ERF domain
PRINTSPR003677.6E-10144160IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    Send to blast
MSPHALNTNV NALHDIGLPV STPFKDASAS VPSTAVFGRN SSFRNIFLAK NWAELPLKED  60
NAEDMVIYGV LREAATMGWL PANGNGVSKV GMAVKMENES QNSDKAAACG THVPPRRGLS  120
FRGVRRRPWG KYAAEIRDAK RNGVRVWLGT YETAENAALA YDRAAFKMHG SKAKLNFPHL  180
IASAHHHVEP IRIALKKHSF DVSLSSSEVA AKRSKNGTAS TNLELNDSNM LQFPMDNRWQ  240
*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-27117185270ATERF1
3gcc_A2e-27117185270ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.07G114300.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003530143.11e-179ethylene-responsive transcription factor 13
TrEMBLK7L1741e-177K7L174_SOYBN; Uncharacterized protein
STRINGGLYMA07G13980.21e-178(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF51233157
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.11e-50ethylene-responsive element binding factor 13