PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Glyma.07G099100.1.p | ||||||||
Common Name | GLYMA_07G099100 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | BES1 | ||||||||
Protein Properties | Length: 179aa MW: 19784.8 Da PI: 10.3849 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 161.7 | 4.9e-50 | 5 | 91 | 1 | 87 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssas 87 g++gr ptwkErEnnkrRERr Raiaakiy+GLRaqGnykl k++DnneV+kALc+e Gw+ve+DGttyrkg+k+++++e+ g+ ++ Glyma.07G099100.1.p 5 GSTGRLPTWKERENNKRRERRQRAIAAKIYTGLRAQGNYKLLKHCDNNEVVKALCAEVGWIVEEDGTTYRKGCKRPSASEIEGTTTN 91 5899************************************************************************99999998876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 9.7E-46 | 7 | 90 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
SMART | SM01163 | 1.9E-12 | 73 | 127 | IPR014811 | Argonaute, linker 1 domain |
Pfam | PF08699 | 2.4E-13 | 88 | 125 | IPR014811 | Argonaute, linker 1 domain |
SuperFamily | SSF101690 | 1.92E-9 | 99 | 161 | IPR003100 | PAZ domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005515 | Molecular Function | protein binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 179 aa Download sequence Send to blast |
MTGGGSTGRL PTWKERENNK RRERRQRAIA AKIYTGLRAQ GNYKLLKHCD NNEVVKALCA 60 EVGWIVEEDG TTYRKGCKRP SASEIEGTTT NIRGGVIGCR GFHSSFRTTQ SGLSLNIDVS 120 TTMIITPGPV VDFLISNQNV RDPFSLDWAK AKRTLKNLMH LKVAIMVLNQ CYIIVGSL* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5zd4_A | 1e-27 | 9 | 90 | 372 | 452 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 1e-27 | 9 | 90 | 372 | 452 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 1e-27 | 9 | 90 | 372 | 452 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 1e-27 | 9 | 90 | 372 | 452 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
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Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Gma.55322 | 1e-131 | cotyledon| epicotyl| hypocotyl| leaf| meristem| root| seed coat| somatic embryo| stem |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Glyma.07G099100.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC235417 | 1e-108 | AC235417.1 Glycine max strain Williams 82 clone GM_WBb0135A07, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006583443.1 | 1e-130 | protein argonaute 4 | ||||
TrEMBL | K7L0R7 | 1e-129 | K7L0R7_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA07G11105.1 | 1e-130 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF26560 | 2 | 3 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36780.1 | 9e-29 | BES1/BZR1 homolog 2 |
Link Out ? help Back to Top | |
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Phytozome | Glyma.07G099100.1.p |