PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.07G049100.2.p
Common NameGLYMA_07G049100
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 337aa    MW: 37986.4 Da    PI: 7.7408
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.07G049100.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.21.5e-13133184155
                          CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          +r++h ++Er+RR+++N+ ++ Lr+l+P++   + ++ + a+i   A++++k+L+
  Glyma.07G049100.2.p 133 QRMTHIAVERNRRRQMNDHLSVLRSLMPPS---YIQRGDQASIIGGAIDFVKELE 184
                          79****************************...9******************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.20E-12131188No hitNo description
PROSITE profilePS5088815.751132183IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.41E-17132199IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.6E-11133184IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-13133198IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.6E-10138189IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    Send to blast
MPFLQMLQSV ESPQFFPLKE PNFQTLLRLQ HMKKPWEGIA YIPRMEAQVQ AALELESCVT  60
HDMLEMQSPV KSESNELQHP LSISCFEKVN YECNQEPQKV SQTCPKSQPA ATRERRKRKR  120
TRPSKNKEDV ENQRMTHIAV ERNRRRQMND HLSVLRSLMP PSYIQRGDQA SIIGGAIDFV  180
KELEQLLQSL EAQKRMRKNE EGGGGSSSST MLCKPPPPSS LSSPHGYGMR SSTSDEVNCG  240
DEVKAENKSE AADIKVTLIQ THVNLKIECQ RRPGQLLKVI VALEDLRLTI LHLNITSSET  300
SVLYSLNLKI EEDCKLCSAS DIAEAVHQIF SFINGS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1114119RRKRKR
2133144RMTHIAVERNRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.07G049100.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2352930.0AC235293.1 Glycine max strain Williams 82 clone GM_WBb0059D15, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003528761.10.0transcription factor bHLH57
TrEMBLA0A0R0JA960.0A0A0R0JA96_SOYBN; Uncharacterized protein
STRINGGLYMA07G05500.10.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46810.11e-68bHLH family protein