PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Glyma.06G284900.1.p | ||||||||
Common Name | GLYMA_06G284900 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | bZIP | ||||||||
Protein Properties | Length: 341aa MW: 38231 Da PI: 6.1945 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 33.6 | 8.8e-11 | 206 | 249 | 5 | 48 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 kr +r NR +A+rsR RK+++i eLe+ v +L+ae + L + Glyma.06G284900.1.p 206 KRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPR 249 899*********************************98777655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.8E-14 | 202 | 266 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF07716 | 2.8E-9 | 203 | 251 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.622 | 204 | 256 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 4.3E-13 | 206 | 257 | No hit | No description |
SuperFamily | SSF57959 | 2.89E-11 | 206 | 260 | No hit | No description |
CDD | cd14703 | 7.24E-22 | 207 | 257 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 209 | 224 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 341 aa Download sequence Send to blast |
MAQLPPKIPN MTPNWPDFSS PHQKMPSLKT MSPNQNPSWV DEFLEFSAAR RGAHRRSVSD 60 SITFLEAPLL DHHHCKGGSV GGGGGSGDNE FERFDDEQFM SMFSDEASGN NNNNNNNNNN 120 NNNTMMENAL SSSNPSTPSD HNSINDEKEM NNKEEEGKKQ VKNESEEDED ESQCKQEITQ 180 LPNNDDSKNN SNANATCSSE KITDPKRVKR ILANRQSAQR SRVRKLQYIS ELERSVTSLQ 240 AEVSVLSPRV AFLDHQRLLL NVDNSALKQR IAALAQDKIF KDAHQEALKR EIERLRQVYH 300 QQNIKKMDNA AGSPPSQSPP SPSPKPRCET HTEKEQLINV * |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Gma.27883 | 0.0 | cotyledon| flower| hypocotyl| leaf| root |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator. {ECO:0000269|PubMed:17719007}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Glyma.06G284900.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT096900 | 1e-112 | BT096900.1 Soybean clone JCVI-FLGm-25J24 unknown mRNA. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001335877.1 | 0.0 | bZIP transcription factor bZIP50 | ||||
Swissprot | Q9M2K4 | 1e-120 | BZP61_ARATH; Basic leucine zipper 61 | ||||
TrEMBL | I1KEU6 | 0.0 | I1KEU6_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA06G43760.1 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2011 | 34 | 88 | Representative plant | OGRP126 | 17 | 181 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58120.1 | 1e-112 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Glyma.06G284900.1.p |
Entrez Gene | 778128 |
Publications ? help Back to Top | |||
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