PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.06G079800.1.p
Common NamebZIP62, GLYMA_06G079800
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 289aa    MW: 31769.2 Da    PI: 5.6252
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.06G079800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_142.81.1e-13121172354
                          XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 
                          + kr rrk +NR +ArrsR+RK+a++  Le  v++L+ eN +L k+    ++
  Glyma.06G079800.1.p 121 DMKRLRRKVSNRDSARRSRRRKQAQLSDLELQVEKLKVENATLYKQFTDASQ 172
                          68*****************************************987665555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.3E-12119183IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.887121184IPR004827Basic-leucine zipper domain
PfamPF001701.7E-11122167IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1709.1E-8123158No hitNo description
SuperFamilySSF579596.66E-10123172No hitNo description
PROSITE patternPS000360126141IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.102.0E-4159193No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    Send to blast
MAMTTTTESD LDYELRYLSL AVTDTFTAFQ NLLPDAMTSF SACGLIDPLC SQNLTPKHST  60
ITATIDSQSS ICATSNVGSP VSANKPEGRE NHTKGATSGS SEPSDEDDEA GACEQSTNPA  120
DMKRLRRKVS NRDSARRSRR RKQAQLSDLE LQVEKLKVEN ATLYKQFTDA SQHFREADTN  180
NRVLKSDVEA LRAKVKLAED MVTRSSFTTL NNQLLQTQHH QMSTPQQLNT TNLRRMAHVS  240
PTITVHGNDV SYNNGGQNSA LGNLDMSFND INEVMNDAMS CGTIWPLD*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1125141RRKVSNRDSARRSRRRK
2135142RRSRRRKQ
3137142SRRRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.383570.0epicotyl| hypocotyl| root| seed coat| stem
Function -- GeneRIF ? help Back to Top
  1. negative regulator of abscisic acid signaling and functions in salt and freezing tolerance
    [PMID: 18365246]
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.06G079800.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0966690.0BT096669.1 Soybean clone JCVI-FLGm-21C7 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001237027.10.0bZIP transcription factor bZIP62
RefseqXP_028235421.10.0basic leucine zipper 9-like
TrEMBLA0A0B2QAD10.0A0A0B2QAD1_GLYSO; Basic leucine zipper 9 isoform A
TrEMBLQ0GPH50.0Q0GPH5_SOYBN; BZIP transcription factor bZIP62
STRINGGLYMA06G08390.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41953458
Representative plantOGRP69561017
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24800.13e-42basic leucine zipper 9
Publications ? help Back to Top
  1. Liao Y, et al.
    Soybean GmbZIP44, GmbZIP62 and GmbZIP78 genes function as negative regulator of ABA signaling and confer salt and freezing tolerance in transgenic Arabidopsis.
    Planta, 2008. 228(2): p. 225-40
    [PMID:18365246]