PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.06G045800.1.p
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 325aa    MW: 36046.3 Da    PI: 6.2289
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.06G045800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.14.1e-102452851055
                          HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          r+RR riN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  Glyma.06G045800.1.p 245 RKRRLRINERLRILQNLVPNG-----TKVDRSSMLEEAVQYMKFLQ 285
                          9******************97.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.97235284IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.37E-14236300IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.5E-12240294IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.7E-10241290IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.97E-11244289No hitNo description
PfamPF000108.1E-8245285IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    Send to blast
MGPVGVGAFP DGEWDCFGKM LANESHYCSP QLLGEDDGSV GMQSMFFATL DVGGNKSMFY  60
SFDSHNSNLQ YISQESSHNN STCSDHSVFM INPEDHTNYH FGYVDHVLAN STSMDFCMMD  120
EKNPGSCVQS DIVMKDNLKR KPDVSKLKVH VEDKINSHGN GNKKPRDSKD VQHCMKNQKL  180
EKNGNQAEEI NAGSDHGCSS SSNTLEDDNA SQANSGGATS ALNLKGKLNK ISRGSATDPQ  240
SLYARKRRLR INERLRILQN LVPNGTKVDR SSMLEEAVQY MKFLQLQIKL LSSDDLWMYA  300
PIAYNGLDLV LNLNHQEFPT FVTL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.06G045800.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028226992.11e-176transcription factor bHLH85-like
TrEMBLA0A0R0JBZ70.0A0A0R0JBZ7_SOYBN; Uncharacterized protein
STRINGGLYMA04G04801.11e-178(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF80733121
Representative plantOGRP10481454
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.15e-35bHLH family protein