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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Glyma.04G150500.1.p |
| Common Name | GLYMA_04G150500, LOC100805968 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
GRAS |
| Protein Properties |
Length: 504aa MW: 56008.3 Da PI: 4.7869 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.04G150500.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 413.6 | 1.8e-126 | 124 | 488 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlsel.aspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevs 88
lv++L++cA+ v++gdl a +l+++++ l a + + ++a yf AL++r++ ++ l + +s +e ++ ++e++
Glyma.04G150500.1.p 124 LVHTLMTCADSVQHGDLPFAGSLIENMQGLlAHVNTnIGIGKVAGYFIDALRRRIFAQGVFLTS---CSY-----PIEDDVLYHHYYEAC 205
689*************************995333332699****************93333322...222.....3444467789***** PP
GRAS 89 PilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfef 178
P+lkf+h+taNqaIlea++g+++vH+iDf+++qGlQWpaL+qaLa Rp+gpp lR+Tg+g p+s+++++l+e+g rLa++A++++v+f f
Glyma.04G150500.1.p 206 PYLKFAHFTANQAILEAFNGHDCVHVIDFNLMQGLQWPALIQALALRPGGPPLLRLTGIGLPSSDNRDTLREIGLRLAELARSVNVRFAF 295
****************************************************************************************** PP
GRAS 179 nvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsles.erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysal 267
+ ++a rled+++++L+v+p+Ea+aVn+++qlhrll+++ + + +++vL ++sl+Pk++ vveqea+hn+ Flerf+eal+yys++
Glyma.04G150500.1.p 296 RGVAAWRLEDVKPWMLQVNPNEAVAVNSIMQLHRLLASDSDPAGsGIETVLGWIRSLNPKIISVVEQEANHNEDMFLERFTEALHYYSTV 385
**9888*****************************987765544499******************************************* PP
GRAS 268 fdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgs 357
fdslea e ++ + +++l+rei+nvv+ceg +r+erhe l kWr+rl++aGFkp++l+++a+kqa++ll ++ +gy vee++g+
Glyma.04G150500.1.p 386 FDSLEAC---PVEPDKALAEMYLQREICNVVCCEGPARVERHEPLDKWRKRLGKAGFKPLHLGSNAYKQASMLLTLFSAEGYCVEENQGC 472
****999...467777888999******************************************************************** PP
GRAS 358 lvlgWkdrpLvsvSaW 373
l+lgW++rpL+++SaW
Glyma.04G150500.1.p 473 LTLGWHSRPLIAASAW 488
**************** PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009723 | Biological Process | response to ethylene |
| GO:0009737 | Biological Process | response to abscisic acid |
| GO:0009863 | Biological Process | salicylic acid mediated signaling pathway |
| GO:0009867 | Biological Process | jasmonic acid mediated signaling pathway |
| GO:0009938 | Biological Process | negative regulation of gibberellic acid mediated signaling pathway |
| GO:0010187 | Biological Process | negative regulation of seed germination |
| GO:0042538 | Biological Process | hyperosmotic salinity response |
| GO:2000033 | Biological Process | regulation of seed dormancy process |
| GO:2000377 | Biological Process | regulation of reactive oxygen species metabolic process |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 504 aa
Download sequence Send
to blast |
MASSSSNGSS SGSKSWDIDG DLAGFGYKVR SSELQHVAEN MERLENVMDI VNSSTNNNIS 60
QLASDTIFYN PSDIGSWIDT LLSEFDQTAS LPYDFSELPD LDTDQIQNLK PTLVTMEEDS 120
GIRLVHTLMT CADSVQHGDL PFAGSLIENM QGLLAHVNTN IGIGKVAGYF IDALRRRIFA 180
QGVFLTSCSY PIEDDVLYHH YYEACPYLKF AHFTANQAIL EAFNGHDCVH VIDFNLMQGL 240
QWPALIQALA LRPGGPPLLR LTGIGLPSSD NRDTLREIGL RLAELARSVN VRFAFRGVAA 300
WRLEDVKPWM LQVNPNEAVA VNSIMQLHRL LASDSDPAGS GIETVLGWIR SLNPKIISVV 360
EQEANHNEDM FLERFTEALH YYSTVFDSLE ACPVEPDKAL AEMYLQREIC NVVCCEGPAR 420
VERHEPLDKW RKRLGKAGFK PLHLGSNAYK QASMLLTLFS AEGYCVEENQ GCLTLGWHSR 480
PLIAASAWHA APVQDRETLR FEQ*
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. Probably acts by participating in large multiprotein complexes that represses transcription of GA-inducible genes. Upon GA application, it is degraded by the proteasome, allowing the GA signaling pathway (By similarity). {ECO:0000250}. |
