PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.02G126100.1.p
Common NameGLYMA_02G126100, LOC100778078
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 200aa    MW: 22954.8 Da    PI: 5.7598
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.02G126100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_148.32.3e-1583140562
                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                          ++ rr+++NRe+ArrsR RK++ ++eL   v  L +eN++L+++l++ ++  +++ +e
  Glyma.02G126100.1.p  83 RKHRRMISNRESARRSRMRKQKHLDELWSQVVRLRTENHSLIDKLNHVSESHDRVLQE 140
                          688********************************************99988887776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.9E-1579143IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.77281144IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.44E-1383133No hitNo description
Gene3DG3DSA:1.20.5.1703.5E-1383156No hitNo description
PfamPF001702.2E-1383141IPR004827Basic-leucine zipper domain
CDDcd147028.22E-2184135No hitNo description
PROSITE patternPS00036086101IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    Send to blast
MVPSEIRGVH YLAPENPFLV PPNFSLLQND IPNLHLNTLL RNFPNCHYPP SGHEFVVPPS  60
SCLSNNSTSD EADEIQFNII DERKHRRMIS NRESARRSRM RKQKHLDELW SQVVRLRTEN  120
HSLIDKLNHV SESHDRVLQE NARLKEEASD LRQMLADMQI GTSFACTMED LEDLPCNTSQ  180
LLKPDPLNES ITPADMIHE*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
195102RRSRMRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.286460.0cotyledon| leaf
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00389DAPTransfer from AT3G30530Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.02G126100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAF3505050.0AF350505.1 Phaseolus vulgaris bZip transcription factor mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003518809.11e-145basic leucine zipper 43
RefseqXP_028204287.11e-145basic leucine zipper 43-like
SwissprotQ9FMC22e-37BZP43_ARATH; Basic leucine zipper 43
TrEMBLA0A445LN251e-144A0A445LN25_GLYSO; Basic leucine zipper 43
TrEMBLK7K7Z21e-144K7K7Z2_SOYBN; Uncharacterized protein
STRINGGLYMA02G13960.21e-145(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF16043399
Representative plantOGRP31041129
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.12e-50basic leucine-zipper 42
Publications ? help Back to Top
  1. Nowak K,Gaj MD
    Stress-related function of bHLH109 in somatic embryo induction in Arabidopsis.
    J. Plant Physiol., 2016. 193: p. 119-26
    [PMID:26973252]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]